| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4120 |
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| Symbol | hmyC |
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| ID | 4040978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 689926 |
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| End bp | 691308 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637979543 |
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| Product | heavy metal cation tricomponent efflux outer membrane porin HmyC |
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| Protein accession | YP_586256 |
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| Protein GI | 94313047 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCA AGAAAACGTT GACTTGGGCC GCCGCGCTGT CGTTGATGAG CGCGCCGGCC
TGGGCCGCGC AGCCCGTGCC GGCCGGCGTT ACCGCCGCGC CCGGGGCTGC CTCGCCACAA
GCGGCGAAGC TCGCCGCCAA GGCCATGGCG CGCGCTACCA CGCCAGCCCC CGATACGTTC
GACCTGCCGC AGTTGCTGCA ACTGGCGCAG TCGACCAACA AGGGCGTGGA AGCCGCGCAG
GCCAATGTGG ATGCCGCCAC GGCTGCTATT ACCAGCGCCC GTGCGTATCC GAACCCGCAG
GTGGAAGTGA TGTATGGACG CCTGTCCGGC AAGCAGCCGG GCGTGACCAG CGGCAATGCG
CCGTCCTACG CAATCGTCCA GAAACTCGAT TACCCGAACC AGCGCAATCT GCGCGAGCAG
ATGGCGGGCC GCGGCCTGGA GGCTTCCGAG GCAATGCGGC AAGGCTTCCG CAGTGACCTG
GCCGCGCGCG TGAAGACGTC GTACTACCAG GTGCTTCGCC GCGAGACCGA ACTGGCCGCC
GCGCGCGAGG ACCTGAACAT GATGCGGCAG ATCCAGGAGC GCGCGAAGGT GCGCGTGAAC
GTCGGCGAGG CCCCGCGCTA TGAATTGATC AAGGCCGACA CGGAACTGCT GGCTGCGCAA
AAGACGCTGC AGACGGCGGA GCTGCGCGTC GACCAGGCCA AGGCCACGCT GCGCCAGCAG
GTGGGAGGCG TAATGCCCGC GCGCTTTGCG CTGGACGGCA GCCTCGGGCA CGCGCCCGAC
ATGCCTCCGC TGGCAACGTT GCGCGACACG CTTCAGGCCA GCAATGCGGA ACTGACCCAG
CGCCGCAGCG AGCTGGAACG CGCGAAGCTG GGCGTGGACT ACCAGCGCGC GCTGCGCTGG
CCCGAGGTGG CGGTGCGTGC CAGCACCGAC CGGCAGCCCG ACAACAATGT TTCGCAGATC
GGCCTGGTGA TGACGATTCC GATCTGGGAT CGCCGCAGCG GCCCGGTGGG CGAGGCGACG
GCGCAGGCCA CGCAGGCCCG CACGGCGCTC GAAGCGCGTG AATTCGAGTT GATGCAGGAA
CTCGACACCG CCTATCGCCA ATACGAGATC GCGCAGGCCC AGGTGACGGC GCTGGAATCG
GGCATCGTGC GCGAGGCCGA GTCGGCCTTG GGCGTGGCCG AATCCGCCTA TCGCTTTGGC
GAGCGCGGCA TTCTCGACTA CCTCGACGCC CAGCGCGTGC TGCGTAGCGC GCGCAGCGAG
TTGATTGCCG CGCAATACGA ACTGCAAGTC GCCGCCATCC AGATTGACAA GCTCATGTCG
GCCTCGCCGG GCGTCAATAC CGCCCCTGCG TCGTCCATGC CCGACCTCCC GAATCTGAAC
TGA
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| Protein sequence | MKTKKTLTWA AALSLMSAPA WAAQPVPAGV TAAPGAASPQ AAKLAAKAMA RATTPAPDTF
DLPQLLQLAQ STNKGVEAAQ ANVDAATAAI TSARAYPNPQ VEVMYGRLSG KQPGVTSGNA
PSYAIVQKLD YPNQRNLREQ MAGRGLEASE AMRQGFRSDL AARVKTSYYQ VLRRETELAA
AREDLNMMRQ IQERAKVRVN VGEAPRYELI KADTELLAAQ KTLQTAELRV DQAKATLRQQ
VGGVMPARFA LDGSLGHAPD MPPLATLRDT LQASNAELTQ RRSELERAKL GVDYQRALRW
PEVAVRASTD RQPDNNVSQI GLVMTIPIWD RRSGPVGEAT AQATQARTAL EAREFELMQE
LDTAYRQYEI AQAQVTALES GIVREAESAL GVAESAYRFG ERGILDYLDA QRVLRSARSE
LIAAQYELQV AAIQIDKLMS ASPGVNTAPA SSMPDLPNLN
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