| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4104 |
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| Symbol | acxR |
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| ID | 4040962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 672617 |
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| End bp | 674602 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979527 |
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| Product | sigma54 specific transcriptional regulator |
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| Protein accession | YP_586240 |
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| Protein GI | 94313031 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTCA CCCACTACGG CACTCTGGTC CCCCGCATCA GCGACGAACC TGTCGTGGCC
TCGGCCTGGG AACGCTTCCT GCGGGACCAT CCCCATCATC CACATGAAGG GGACGGTGTG
CGCAGAGTTG TCCTCGCTTC CTGGCAGCGG TGTCGTTCCG AAGCTGTCGA CCCGACCCTG
CATTCGGCGC CGGGCGCCGC CGACGATCGC CTTCGACAAC TGCGCACGCA AAACCGCGAC
CTCTGCGACG CAGCGGGTCC GGCGCTCGAA GGCCTGCGCG ACATCTTGCG CGAATGCGGC
ACGCTGATCA TGCTCAGCGA CACCGACGGC ACCATCCTTC AGCTCAATGG CTCGACCCGC
GTGCGCAGCG TCGGCGAGGA AGTCAACCTT GCCATGGGCG GATGCTGGAG CGAGGAAGTG
ATCGGCACCA ATGCCATCGG CACCGCAATC GCCACCGTCG CGCCGGTGCA GATCCATGCC
AGCGAGCATT TCTGCTGGGA CGTCAAACGC TGGACCTGCG CCGCCGCGCC GATACTCGAT
CCGTTCGGAC GTCACCTGCT TGGCGTCGTT GATGTATCGG GGGTGAAGGA GTCATTCCAC
GGGCACACCC TCGGTCTGGT GGTGGCGGCG GCCCGGCAGA TCGAGAGCGA ACTGGCGCGG
CGCGACATGG CGATGCACGA GCGCCTGCTA GCCCGCTCCA TCGATGATTT CGTGCGCTAT
GCCAGCGACT GCGTGGTCCT TGCCGATTTC CGCGGCCGTG TCGTTCGTAT CAACGGCCGC
GCGCAGGCGG CGCGGGATGC CCATGGCGTA TGTTTCGCAC TGGAGACCGG CAACGCGATA
CCAGGGCTCG ATCTCACACT GCCGGAAGTC GATCAAATAC ATCAGCGCCC GGGCTGGCTG
CGGCCCGAAT GGCTTCACAC GGTCAAGGAT CGCGAAGGAC TGCTCGGCAC GATGCTCGTG
ATTCCACTCG CGGCACGCCC GGGCCGGACC AGCATTTCAC TCCCCGCCAC CCCGACTGCG
GTGACAACGG ATGACGCGTT CACCGAGATC ATCGGCGAGA GCGAAATTCT CGCCGCCACC
AAGGCACGCG CCCGCCGTAT CGCGTCGCTC GATCTGCCCG TGCTGCTGGT CGGTGAGACC
GGCGCGGGCA AGGAGCTGTT CGCGCGCGCG TTGCATCGGT CTGGCAAGCG GCCCGACGGT
CCATTCGTTG CCGTGAATTG CGGCGCCCTG ACGCGCGAAT TGCTGGCCAG CGAGCTCTTT
GGCTACGCGG AAGGCGCCTT CACGGGGGCG CGTCGCGGCG GCCATCCGGG AAAATTCGAA
CAGGCCGCAG GCGGCACGCT GTTCCTCGAC GAGATCGGCG AGATGCCGCT CGACATGCAG
CCGCATCTAT TGCGTGTGCT GCAGGATGGC GTGGTGGTTC GTCTGGGGGA TACGAGGGAG
CGGCAGGTAT CGGTCCGACT TGTCGCCGCG ACCAACCGCG ATCTGCAGAA GGAGATTGCC
GCCGGGCGCT TTCGCGAGGA TCTGTACCAC CGTCTCTGCG CGGTCAGTCT GCAGCTTCCG
GCCCTACGCG ACCGGCCTGG CGATATCGAG TCCATCGTCG ATCACCTCAA CCACAAGCTC
GCGCGCAAGT ACGGGTGCGC GCCGAAGCAG ATCGAACCGT CGGTCTATCA GACACTGGTG
CGCTATCGCT GGCCCGGGAA TATTCGTGAA CTGCAGAACG TATTCGAGGT GATGTTCGCG
CTCGGCGAGA ACAATGGCAT CGATGTGTCG ATGTTGTCCT CCCTAGTCGA ATCCGGACCG
GCCGGAGACG CGATGGCACC GGCCCCGATG CCGATGTCGG CAGCGTCTGG CCGCCTCGAC
GATCTGGAGC GGCAGGCGAT ACGCGCCGCC ATCAACGATG CGCGCGGCAA CCTTTCAAAG
GCCGCCAGAA CGCTGGGGAT TTCAAGAAGC ACGCTCTACG TCAAGCTTGC GGCCCTCCGG
ACCTAA
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| Protein sequence | MPFTHYGTLV PRISDEPVVA SAWERFLRDH PHHPHEGDGV RRVVLASWQR CRSEAVDPTL
HSAPGAADDR LRQLRTQNRD LCDAAGPALE GLRDILRECG TLIMLSDTDG TILQLNGSTR
VRSVGEEVNL AMGGCWSEEV IGTNAIGTAI ATVAPVQIHA SEHFCWDVKR WTCAAAPILD
PFGRHLLGVV DVSGVKESFH GHTLGLVVAA ARQIESELAR RDMAMHERLL ARSIDDFVRY
ASDCVVLADF RGRVVRINGR AQAARDAHGV CFALETGNAI PGLDLTLPEV DQIHQRPGWL
RPEWLHTVKD REGLLGTMLV IPLAARPGRT SISLPATPTA VTTDDAFTEI IGESEILAAT
KARARRIASL DLPVLLVGET GAGKELFARA LHRSGKRPDG PFVAVNCGAL TRELLASELF
GYAEGAFTGA RRGGHPGKFE QAAGGTLFLD EIGEMPLDMQ PHLLRVLQDG VVVRLGDTRE
RQVSVRLVAA TNRDLQKEIA AGRFREDLYH RLCAVSLQLP ALRDRPGDIE SIVDHLNHKL
ARKYGCAPKQ IEPSVYQTLV RYRWPGNIRE LQNVFEVMFA LGENNGIDVS MLSSLVESGP
AGDAMAPAPM PMSAASGRLD DLERQAIRAA INDARGNLSK AARTLGISRS TLYVKLAALR
T
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