Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4087 |
Symbol | |
ID | 4040945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 655530 |
End bp | 656096 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637979510 |
Product | hypothetical protein |
Protein accession | YP_586223 |
Protein GI | 291481511 |
COG category | [S] Function unknown |
COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00226644 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCATCCG TGGCGCTCAT CGGGCTGCTG GCCGGCTGCA GCTCGCCGAA ATCGCGGTTC TACACGCTAG ATCCGGACAA CACCGTGGAA CGTGCCTCCA CCGCGACGCC AATCCGTGTC GTCGTCGGGC CGGTAACAAT CCCGGATCTG GTCGATCGGC CTCAGATCGT GACACGTGTC TCGGCCAATG AAGTCAAGGT CAACGAATTC GCACGCTGGG CCGAGCCGCT CAAGTCCGAA ATCTCCCAGG TCATCGCCGC CGATCTGAGA ACCATGCTGG GGTCCGATCA AGTGACTGTC TTCGATACTG GTTCGAATGC AATGCCGGCC TGGCGTGTCC GCGTGGATAT CCTGAGTCTG GATTCGGAGC CGGCCGTCGC CGTGTCGATG GATGCGCTGT GGACCATCCA GCCGCCGGGG AAGCAGCCGG CGATTGCCGG GCGCTCGGTG GTGCGCGAGG CCGTTGCCAG CGATGGCTTC GACGCGATCA TCGCAGCGCA TAACCGCGCC CTCGCCTCGG TGAGCCGCGA TATCGCCACG TCGATTCGCA CCCAGCCGGG CCGCTGA
|
Protein sequence | MASVALIGLL AGCSSPKSRF YTLDPDNTVE RASTATPIRV VVGPVTIPDL VDRPQIVTRV SANEVKVNEF ARWAEPLKSE ISQVIAADLR TMLGSDQVTV FDTGSNAMPA WRVRVDILSL DSEPAVAVSM DALWTIQPPG KQPAIAGRSV VREAVASDGF DAIIAAHNRA LASVSRDIAT SIRTQPGR
|
| |