| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4060 |
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| Symbol | ccmA |
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| ID | 4040918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 626106 |
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| End bp | 626741 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637979484 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_586197 |
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| Protein GI | 94312988 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.438117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGACG CGGTACTGGA GGCCCGCGAG CTTGGCGTCC GGCGCGGCCA TTGCGCTATC
TTCCGTGGCC TCGGCATTTC CCTGGCACCC GGCGACCTGT TGCAGGTGAT GGGCCCGAAC
GGTGCTGGCA AGACCAGCCT GCTACGCGTG TTGTCCAGCC TGATGCCACC CGCCGAGGGC
GACCTGTACT GGCGAGGCCG CGCGGTGCGG GCCGGAGACC CCGACTATCT CGCGCAGGTT
GCCTACCTCG GCCACGTCAA CGGCATCTAC CCCGACCTGT CCGCTTTCGA GAATCTTCAG
TTCGCCGCTC GCATGGCTGG CCAGCAGCCC GATGCGGATG CCATGCACCA TGCTCTTGCC
CGGTTCGGTC TCGATCGTGT CGCCGATGCC CCGGCGCGCA CGCTCTCGCA AGGACAGCGC
CGCCGCGTGG CGCTGTCCCG GCTGGCGCTG ACGCCACGCG CGCTATGGCT GCTCGATGAA
CCGCTGACTT CGCTCGACGA CGCATCGACC GACTGCTTCC ACACGCTGCT CGCCGAGCAC
CTGCAGCGGG GCGGCATCGC CGTGGTCGCC ACGCATCAGC GGCTGCCCGC CGAGGGTGCG
GTGCTCGATC TCGCCACAGA CGCGGGTTCG CCATGA
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| Protein sequence | MADAVLEARE LGVRRGHCAI FRGLGISLAP GDLLQVMGPN GAGKTSLLRV LSSLMPPAEG
DLYWRGRAVR AGDPDYLAQV AYLGHVNGIY PDLSAFENLQ FAARMAGQQP DADAMHHALA
RFGLDRVADA PARTLSQGQR RRVALSRLAL TPRALWLLDE PLTSLDDAST DCFHTLLAEH
LQRGGIAVVA THQRLPAEGA VLDLATDAGS P
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