| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4055 |
|---|
| Symbol | ccmG |
|---|
| ID | 4040913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 621481 |
|---|
| End bp | 622032 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637979479 |
|---|
| Product | periplasmic thioredoxin of cytochrome c-type biogenesis |
|---|
| Protein accession | YP_586192 |
|---|
| Protein GI | 94312983 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCT TCCTGCTTCC ATTGGGCGTA TTCCTGGCGA TCGTGATCGC CCTGGCGGCG
GGGTTGCGCC ACGATCCGCG CGAGCTGCCT TCTTCGCTGG TGGACAAGCC TGCGCCCGCA
TTCGTGCTGC CGGTACTCGA GACCTCTGCA AACGCCAATG CGCAAAAATT CGACCCGGCC
AGCCTGCGCG GCAAGGTCTG GGTGTTGAAT GTCTGGGCGT CCTGGTGCAC CGCGTGCCGC
GCCGAGCATC CGGTCCTGCT CGGCATGGCC GGGCAAACGC AGGTGCCGCT CTATGGCCTG
AACTACAAGG ACACGCGCGG CGCGGCGCTG GAGTGGCTGC AACGGATGGG CGACCCGTAC
AAGGCCTCGG CCGTCGATGC GGATGGCCGC GTCGGCATCG ACCTTGGCGT GTACGGCGTG
CCGGAGACCT TCATCATCGA CGCAGCGGGC GTGGTGCGCT ATCGCCAGGT CGGCCCGGTC
ACGCAGCAGG TTCTCGAACA GAAGCTGCTG CCACTCCTGA AATCGCTCGA AAACGGGGGC
AGCCGTGCCT AG
|
|---|
| Protein sequence | MMRFLLPLGV FLAIVIALAA GLRHDPRELP SSLVDKPAPA FVLPVLETSA NANAQKFDPA
SLRGKVWVLN VWASWCTACR AEHPVLLGMA GQTQVPLYGL NYKDTRGAAL EWLQRMGDPY
KASAVDADGR VGIDLGVYGV PETFIIDAAG VVRYRQVGPV TQQVLEQKLL PLLKSLENGG
SRA
|
|---|
| |