Gene Rmet_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4000 
SymbolfecR 
ID4040858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp571663 
End bp572607 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content69% 
IMG OID637979424 
ProductFecR-like transmembrane sensor, Fe2+-dicitrate sensor 
Protein accessionYP_586137 
Protein GI94312928 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0775508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTCG CCGCAGTGGA ATGGTTGGTA ACGCTGCAAG GCGGTGAAAC GGATGGGGCA 
TCCCACGCCG CGTGGCGCCA TTGGCTCTCT CAGCATCCCG ACCACGCGCG CGCCTGGGCG
CGGATCGAGG CAGTGAATGC GCGGCTGCGC GACGTCGCGT CGCCACTGAC CACGGCCGTC
GCGCACGCGG CGCTGACTAC GCCGCGCTCC GCGAGTCGCC GCCGGGCCGT CCAGGCGCTG
GTGGTTGCCT TCACCGGCGG CGCGGCAGCA TGGGCTGCGC GAGATCACGC GCCATTGCAG
GACTGGCTGG CCGATGTAAG TACGGCCGTG GGTGAGCAAC GTCTTCTGTC GCTCGCGGAC
GGCACGCAGA TCAGACTCAA TTCCGATACC GCCATCGATA TCGCCTTCAC GGCCACCGAG
CGGCGTGTTG TCCTGCGACG CGGCGAGATC CATGTCCAGA CAGCCCCGGA TCGACACTGG
CCAGCGCGCC CATTCATCGT CGCAACCGCC TCGGCCACGC TACGCCCAAT GGGCACCCGG
TTCGCGGTGC GCGTATCGGG TGACGCCGGC TGGATCGCCG TCACCGAAGG CGCCGTCGCG
GTTCAGCCAC AGGCGGACCC TACTGGCGGA CGCATCATCG CCGCGGGCAA GCAGGCACGG
TTCACCCCGG CGAGCGTCGG TGCGCCCACG CCGCTGCCCG AGAGCGATAC CGCCTGGACC
GACGGCATGA TCGTCGCCAC GGACATGCGC CTGGCGGATT TCCTCGCCGA GGTCGACCGT
TACCGACCCG GGCGGCTGCG CTGCGCCCCG GACGTGGCCG ATCTGCGCGT GTCCGGCACC
TTTCCAGTAG CCGATACCGA TCGCATCCTC GATGCCCTTC GCACCGCCCT CCCCGTGCGC
ATCCATTTCC TGACGCGCTA CTGGACAACG GTCCTTCCCG CCTGA
 
Protein sequence
MALAAVEWLV TLQGGETDGA SHAAWRHWLS QHPDHARAWA RIEAVNARLR DVASPLTTAV 
AHAALTTPRS ASRRRAVQAL VVAFTGGAAA WAARDHAPLQ DWLADVSTAV GEQRLLSLAD
GTQIRLNSDT AIDIAFTATE RRVVLRRGEI HVQTAPDRHW PARPFIVATA SATLRPMGTR
FAVRVSGDAG WIAVTEGAVA VQPQADPTGG RIIAAGKQAR FTPASVGAPT PLPESDTAWT
DGMIVATDMR LADFLAEVDR YRPGRLRCAP DVADLRVSGT FPVADTDRIL DALRTALPVR
IHFLTRYWTT VLPA