Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3992 |
Symbol | mrcB |
ID | 4040850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 560582 |
End bp | 562645 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979416 |
Product | bifunctional peptidoglycan glycosyl transferase/transpeptidase |
Protein accession | YP_586129 |
Protein GI | 94312920 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.155009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.126986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCA TGAAAAAGAT TGCAGTCAAG GCTGCCGGCG TCGTCGCGGC GCTGGGAGCC GCCGGCGTCC TGCTCGTCGG CTTTGCCGCG GTAGTCAGCC TGCGGCAACT TCCCTCGGTC GACGCATTGC GCGACTATCG TCCCCAGGTA CCGCTGCGCG TGTTCACCAG CGACGATGTT CTCATTGGCG AGTTTGGCGC CGAGCATCGA GAGTTCATCC CGATCGAGAG AATGCCGAAG CTGATGACCG AGGCACTACT CGCGGCCGAG GACGACCAGT TCTACAACCA TGCCGGCGTG GACATCCCCG GCCTGGTCCG CGCGGCGCTG GCAGACCTCG GCGAGGGCTA CGCGCAGGGC GCATCCACCA TCACGATGCA GGTGGCGCGC AACTTCTACC TGTCCCGCGA AAAGACGCTC GCCCGCAAAT GGTACGAAGT CCTGCTGGCA TGGCAGATCG ACCGCACGCT GCCCAAGGAC CGCGTCCTTG AGCTCTACAT GAACCAGGTC TACCTGGGCG AGCACGCCTA CGGCTTCGGC AGCGCCGCGC AGACGTACTT CGGCAAGCCG CTGGCGTCGC TCTCTCTGGC GGAGACCGCA ATGCTGGCGG GGCTGCCCAA GGCACCCTCG ACGATGAATC CGCAGGTGAA CTACCCGCGC GCCAAACGTC GCCAGGAGTA TGTGCTCGGC CGGATGCTGG CGCTGGGCAT GATCACGCAG GACCAGTATC GCGAGGCGCG CGGCGCGCAA CTCGTAGTGA GCCGCGACGC CAACGGCAGC TTCAGCGGGC ACGCGGAGTA CGTGGCCGAA CTGGCACGGC AACTGGCGTT CGACCGCTTC GGCGACGAAG CCTATACGCG CGGCATCAAT GTCTACACCA CGGTGTCGTC GGTGCGCCAG ACATTGGCGT ACGACGCCGT GCAGGCCGGA CTGGCCAGTT ACGGCAAGCG GCACGGCTCG GCGAAGGCAC AGGTCGCGCT GCCCCAGGCG GCGCTGGTCT CGCTCGATGC GAGCACCGGC GCGATTGAAG CCATGGTGGG TGGCGCCAGT TTCGATACGA GCCGGTTCAA CCACGCCACG CAGGCACAGC GCCAGCCGGG ATCCACGTTC AAGCCGTTCA TCTATTCGGC CGCGCTGGAG CGCGGCATTT CGCCCGGCAC GCTGATCAAC GACGCGCCGC TCGACGACCC GCGCTGGCAG CCGTCGAATG ATGACAATCG CTTCGTCGGC CCGATCACGG TACGTCAGGC GCTGGCGGAA TCGCGCAACC TGCCGGCTAT CCGCACGCTG CGCGCCATTG GCATCCCCTA CGCAATCGAC TTCGCGGGCA AGTTCGGCTT CTCCACCAAG CGGCTGCCGC CGTATCTGCC GCTTGCGCTG GGCACGGGCA CCACGTCGCC GCTGCGACTG GCTGCCGCCT ATGGCGTGTT CGCCAACCAG GGCCACCGCA TCGAACCCTA CCTGATAGAC AAGATCACGG ATGGCGACGG AAACGTGCTG TTTGCCGCGC AGAACGCAGC GGAGGTGACG CGTGTGATCT CCGAGCGCAA TGCGTTCGTG ATGAACAGCC TGCTGCAAAG CGTGGTGGAC GAGGGCACCG GTACCGGCGT GAAACGCTAT CTGCGCCGGG ACGATGTGGC CGGCAAGACC GGCACCACCA ACGATTCGGT AGACGGCTGG TTCGCCGGCT ACGCGGGTGA TGTGGTAACC GTGACGTGGA TGGGCTTCGA TGACAATCGC AGCCTGGGCC GGCACGAGTT CGGCGCGACC ACCGCGCTGC CCATCTGGGC TGCCTACATG GAAGGACGCC TGGCCGGCGC GCCAGAAGCC AGCTTCCCGA CGCCACCGCA GCTTGCCCGC CTTAATGACG ACTGGGCCTA CGCGGAGAAC GCGGACGGAT CCCACGGAAT TGCATCGATT GGATTCCCGC CACCGACTGT CACGCCGGAC GTACCTGCCG AGGGCAGCCC TCCCGGCGCA CCGACAGCCG CGGCGCCGAC CCCTGCAGCG CTTGAGGTAT CGCCGCAGGT ATCGTCCCAA CGTCCTGCCG CTACCGGCCT GTGA
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Protein sequence | MRAMKKIAVK AAGVVAALGA AGVLLVGFAA VVSLRQLPSV DALRDYRPQV PLRVFTSDDV LIGEFGAEHR EFIPIERMPK LMTEALLAAE DDQFYNHAGV DIPGLVRAAL ADLGEGYAQG ASTITMQVAR NFYLSREKTL ARKWYEVLLA WQIDRTLPKD RVLELYMNQV YLGEHAYGFG SAAQTYFGKP LASLSLAETA MLAGLPKAPS TMNPQVNYPR AKRRQEYVLG RMLALGMITQ DQYREARGAQ LVVSRDANGS FSGHAEYVAE LARQLAFDRF GDEAYTRGIN VYTTVSSVRQ TLAYDAVQAG LASYGKRHGS AKAQVALPQA ALVSLDASTG AIEAMVGGAS FDTSRFNHAT QAQRQPGSTF KPFIYSAALE RGISPGTLIN DAPLDDPRWQ PSNDDNRFVG PITVRQALAE SRNLPAIRTL RAIGIPYAID FAGKFGFSTK RLPPYLPLAL GTGTTSPLRL AAAYGVFANQ GHRIEPYLID KITDGDGNVL FAAQNAAEVT RVISERNAFV MNSLLQSVVD EGTGTGVKRY LRRDDVAGKT GTTNDSVDGW FAGYAGDVVT VTWMGFDDNR SLGRHEFGAT TALPIWAAYM EGRLAGAPEA SFPTPPQLAR LNDDWAYAEN ADGSHGIASI GFPPPTVTPD VPAEGSPPGA PTAAAPTPAA LEVSPQVSSQ RPAATGL
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