| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3986 |
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| Symbol | |
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| ID | 4040844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 555473 |
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| End bp | 556126 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637979410 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_586123 |
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| Protein GI | 94312914 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.039666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGCGA AAACCATTCG GGTGGCGCTG GCGGATGATC ATCCGCTCGT CGTTGTCGCT
TTGCGAGATT GCTTGCAGCG TACTCCGGGC TTCCAGGTGA CATGTGAATG CACCAACGGC
AGTGAACTGG TCGACGCCTT GACGCAGAAT CCGGTCGACG TTGCCGTCAC CGACTTCAGC
ATGGGGCATG GCGATACGTC GCTGGACGGA TTCAATCTGT TGCGCAAACT GCACAGACGC
CATCCGGACA CGCGTATCGT GGTGGTCAGC GCCCAGACGA ATCCTGGTGT GGTCAGCCGC
GCGATGAAGC TCGGCGCGCG TGCGTTCGTC AGCAAAGAAG ACGAACTCGA CGAAATCGTG
CGCGCCTGTA TCCATGTCAC CGTCAGCAAC GGCCACTTCT ATTCGCCGTC GATTCGGGCG
GTGCTGGACA GCGCCACCGC GGCGGCCACA GCCGCCCCCG CCACGGATCT GACATTGCGT
GAGCTCGATG TCGTGCGGCT CTATGCGCAG GGCTTCCAGC TCACCGAGAT CGCCAACAAG
CTCGGGCGGT CGGTGAGCAC GATCTCCAGT CAGAAAACCG TTGCCATGCG CAAGCTGAGC
GTCCAAACCA ATACGGACCT TATCCGCTAT GCCTATGAAA ACGGTCTGAT CTGA
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| Protein sequence | MIAKTIRVAL ADDHPLVVVA LRDCLQRTPG FQVTCECTNG SELVDALTQN PVDVAVTDFS
MGHGDTSLDG FNLLRKLHRR HPDTRIVVVS AQTNPGVVSR AMKLGARAFV SKEDELDEIV
RACIHVTVSN GHFYSPSIRA VLDSATAAAT AAPATDLTLR ELDVVRLYAQ GFQLTEIANK
LGRSVSTISS QKTVAMRKLS VQTNTDLIRY AYENGLI
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