Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3985 |
Symbol | |
ID | 4040843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 551994 |
End bp | 555464 |
Gene Length | 3471 bp |
Protein Length | 1156 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637979409 |
Product | signal transduction histidine protein kinase |
Protein accession | YP_586122 |
Protein GI | 94312913 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0386149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAG TTCTCGATCG CACTCAGGAG TCGCTGGCGC AGGCGTTTGC TTCCCTGGCG CGCAACGCAA GACGGCAGCG TCAGCTCTAC TACGCCACAG TCGGCCTCCT GATTGCGATC GTCATCGTAT CGGCCATCCT GCTCGGCGGA CTCGCGGCTG CCAAGCAGCT CGACATCCGG CGCAGTCGTC TTGCCCAGTA TGTCAGCGCG ATCTCCCTTC AACTCCAGAG CGATGCCTCA TTCCTGCGCC GAACGACGCT GACGGTGGCG CATTACCTGA ATGCCCACAG CGATTCGCCT ACCGATCCCG ATCTGCTCGA ACGCATTCGT CGGACTGGCG TCGCCGTTGC TCCTGATGGC CGCTACACAT TGCTGATACC CTCGAGCACG CAGCAGGCTT GGGGCCGTTC GCTCCCAGAA CGCGTCTGGC AATTGCAGCA GATTGCCATC GCCGCGCTGA CCACCCGCCT CGCCTTCGAA CTCGACAATC CCGCCTACGT GGTCGACGCG AATGCCGAGT ACGCGGTCAT CCTGACACCG TCTCCAATGT CACTCGATGC GGTGCTTCTG ATTTCAGAGC AAAGCGACCC TGTGACAGTA CTGCGGGACA AAATCGTTCA GGCATTGCAG GCCCAGACTG GTCAGGAACT TCCGCGTAGC GGCGAGCAAG TATGGATCGG CCCCGTCGAG GATCCGGTGC TGCACTCGCA AGTGATGACG TCCGTGGCCG CTACAACGGC AGGCGACGGA CACCGACCTG CGCTCATCGC ATCGAGTACA CCTGTCAATG CCTTCCTGTC CCAGCTCAAG CGCCCGAGCG GTGCGGCCAT GCTGCTGTTG CTCAATCGCG CCGAAGACCG CATCGACATC TCCCCGTCGG GAAGCTCACT CGAAGTCGCG GAACGCATTC TCTCGCGCAC GCGCCGCCTG CCCCCCGATA CACTCCGGCT CGGAAGATCC GGGTTGGTGC TGGTGCAGCC ATTGCGCCAG GAGTTTGGCT CCCTCGTCTA TTTCCTGTCC TATGGCAAGC TATTCAGTTC GATCTACTAC GAACTGATAG CCATTGGCTC CCTGAGCATG ATGTTGATCA TCGCAATCGT GATATCCGCG CGCTATTGGG ACATTCATCT GCTGCGGCAC GGCCAGGCCG AAGCTACTCG CGCGCTTGAA AACGAAACGA TCAACCATAT CCTCGTCAAT GCCACCCCGA TCGGGCTTTG CATCGTCGGC CAGCAAGACC ACGTCATCGT GACCTCGAAC TTGGTTGCCG ACACGTTGCT TGGATTCAGT CAGGGAGCAA CCATGCCCGC CCGGATCATC GACGCCCTGC GCCAACGCCC CTCGCAGGCT TTCAGTGACG CGTTCGGGCC AATTGCACAG ATCAGGGTGC CCGGGTGCGC CAATGCCGAC GCAGCCCAGC AGTGCAATTC CACGACGGAA GCCGCACCTG CTTCGAAGCC ACAGTTTTTG CAGATTACAT CAGCCCCCGC CAAGTACCGC GGAGAGTGCG TGCTCTTCTG TGCCATTCAG GACGTAACAG CACAACAACA ACTCGAACAG AAGCTTCGCT CGGCCCAGCA AGCTACGGAA GCCATGATGC GTGCCCGATC AAACTTCTTT GCCGCGATGA GCCATGAGAT ACGCACACCA CTGAATGCGC TTCTGGGCAA TCTCGAACTG CTTGGGCGTA GCGCCGGCCT CGAGGCACAC GCAACCCGGC TGCGCGCATT GCAGTCGTCC TCCGAAGGGC TGCGCCGCAT CGTCAACGAT ATTCTTGATT TCTCGAAGAT AGATGCTGGC GAGATGAAGC TCGTCTCCGC GCCTTTCAAT CCGCTCGACG AACTTGAGAG TCTGTCCCTT TCCTACGCGC CCATGGTGAC GGATCGACCG ATCCGCTTCT ACGCCCACCT TTCGCCTACC CTGAGTACGC TTCTGAGGGG CGATCGTATG AGGCTGGCGC AGATCGTCAA CAATCTGCTT GGCAATGCGT TCAAGTTCAC GGCGAGCGGG AAAATTTCGC TTAGTGCGGA AATCTCTCGA GATGCGCAAG GACTGGCGAC GCTGGTCTGC CGGGTGCGAG ACACCGGAGA CGGCATGTCT CAGGCGCTGG CTTCCCGTGT GTTCCAACCC TTTGTGCAAG GCGAGACCAG CACCACGGCT CAATACAGCG GCACTGGACT CGGCCTCTCC ATCTGCGCCC GACTTAGCGA GCTGATGGGC GGACACATCA GCGTTGAAAG CGTCGAGGGC GTGGGCAGTG CCTTCACGGT AGTCATTCCG TTTGCCGAGC CCGCGGCAAC GGCCCCTCCA CATGGACTGA CGATGCTCGG TGGCATGGTC ATGGTGCTGT GCCAGGAAAC GGAATCCGGC GCCACGCTGG AAGCGTGGCT GACAAGGGTA GGCTGCCAGG TGCATGTACT GCCTGCCAGT TGCGCCGCCC ACGCGTGGCT GTGTACCAGC CACCCCCAGA TTATGGTTGT GACCGGAGAG TATGGACTCG ACACAATCAG ATCACTTCGA ACCGTTTGCC CGACAAACGC CGTGTGGATC ACGCGCAATG GGCCGGATCG CCCAGCAGAG CTGGAATCGG GGATCTTCGA GGTTTCCGCA TACAGCCACA CCGCCATCCT GGCGGGCGTC AAGGCCGCAT TGGTCGCTCC TCCGCGACTG GTCGAGACAA CGAACCGAAC CGCCAGCGCC AGTGAAAACG CGCGGCCCGA AGCGGCTTCC CACTCGCCCC ATCAGCACGG CACGGTTCTG GTCGCCGAAG ACAACCCACT GAATCGCATG CTGATTGCCG AGCAACTCGA GACGATCGGC TGGGCGTCAA TCGTGGTCAA CGATGGGCGC CAGGCACTCG CGGTGCTCGA TCAACGAGTT GTCGACATCG TGCTGACCGA CATTCAGATG CCGGTAATGA ACGGATATGA ACTGCTATCT GCAATCAAGA CCAAAAGGCC GCCGCTGCCG GTTTTCGCAT TCAGCGCAGT CACGCACGCC GGTCAGGCCT CTGACTGGCA AGCGCGCGGA TTTGACGGCT ACATTGCCAA GCCCGTGTCG CTGGCGGAGC TAGAGCACGC CCTGCACGGC GTGTCCTCGC AACTGGCCGT AGATGCCGCG CGCTCCACGC CCGCCTCGAC CGGAAGCCCC ACCGACATCG TCGCGGGGGC GGATCGCGAG CGCTACCTGG CGCTGCTGCG CGAACACCTG CAAACGGACG AGCCCAAGCT TGCCGGCATC CTGCTCAGCC GCAATACCCA GGCGTTGGGC CAATGGGCTC ACCGTTGCGC GGGGGCATTC CTGATCGTCG GCGCAACCAC CATCGTCAAG CTTTGTCGAG CCGTAGAGCG GCTCTGCGAT GACGGCAACG AGTGGTCGCC CCTCCTGGAA ACAGAAGCCC GGGCATTGCA GGCTGCGGTG CATGACTTCC GTGCCAGCCC GAATCAGCCC GAGGAAACGT CAACCACCTG A
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Protein sequence | MQQVLDRTQE SLAQAFASLA RNARRQRQLY YATVGLLIAI VIVSAILLGG LAAAKQLDIR RSRLAQYVSA ISLQLQSDAS FLRRTTLTVA HYLNAHSDSP TDPDLLERIR RTGVAVAPDG RYTLLIPSST QQAWGRSLPE RVWQLQQIAI AALTTRLAFE LDNPAYVVDA NAEYAVILTP SPMSLDAVLL ISEQSDPVTV LRDKIVQALQ AQTGQELPRS GEQVWIGPVE DPVLHSQVMT SVAATTAGDG HRPALIASST PVNAFLSQLK RPSGAAMLLL LNRAEDRIDI SPSGSSLEVA ERILSRTRRL PPDTLRLGRS GLVLVQPLRQ EFGSLVYFLS YGKLFSSIYY ELIAIGSLSM MLIIAIVISA RYWDIHLLRH GQAEATRALE NETINHILVN ATPIGLCIVG QQDHVIVTSN LVADTLLGFS QGATMPARII DALRQRPSQA FSDAFGPIAQ IRVPGCANAD AAQQCNSTTE AAPASKPQFL QITSAPAKYR GECVLFCAIQ DVTAQQQLEQ KLRSAQQATE AMMRARSNFF AAMSHEIRTP LNALLGNLEL LGRSAGLEAH ATRLRALQSS SEGLRRIVND ILDFSKIDAG EMKLVSAPFN PLDELESLSL SYAPMVTDRP IRFYAHLSPT LSTLLRGDRM RLAQIVNNLL GNAFKFTASG KISLSAEISR DAQGLATLVC RVRDTGDGMS QALASRVFQP FVQGETSTTA QYSGTGLGLS ICARLSELMG GHISVESVEG VGSAFTVVIP FAEPAATAPP HGLTMLGGMV MVLCQETESG ATLEAWLTRV GCQVHVLPAS CAAHAWLCTS HPQIMVVTGE YGLDTIRSLR TVCPTNAVWI TRNGPDRPAE LESGIFEVSA YSHTAILAGV KAALVAPPRL VETTNRTASA SENARPEAAS HSPHQHGTVL VAEDNPLNRM LIAEQLETIG WASIVVNDGR QALAVLDQRV VDIVLTDIQM PVMNGYELLS AIKTKRPPLP VFAFSAVTHA GQASDWQARG FDGYIAKPVS LAELEHALHG VSSQLAVDAA RSTPASTGSP TDIVAGADRE RYLALLREHL QTDEPKLAGI LLSRNTQALG QWAHRCAGAF LIVGATTIVK LCRAVERLCD DGNEWSPLLE TEARALQAAV HDFRASPNQP EETSTT
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