| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3977 |
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| Symbol | livF4 |
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| ID | 4040835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 543940 |
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| End bp | 544647 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979401 |
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| Product | branched-chain amino acid ABC transporter ATP-binding protein |
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| Protein accession | YP_586114 |
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| Protein GI | 94312905 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.099286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00201124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTGCAGC TTGATCGCGT CTCGCTGTCG TACGGCAGCT TCCGCGCCCT GGACAATATC
TCGCTGCACG CAGGCGCCGG AGAACTCGTG GTACTGCTTG GCGCGAACGG CGCGGGCAAG
AGCTCCATCT TCCTGGCGAT GAGCGGCATC CATCGCATCA GCGGCGGCAG CATGCGTTTC
GACGGCCGCG AGCTTAGCGG GATGAAACCG TCGCAAATCG TGCAGGCGGG ACTCGTGCAC
TGCCCAGAGG GCCGCAAGCT GTTCCCCGCA ATGAGCGTCG AGAAGAACCT GACGCTTGGC
GCGTATGTGC ATCGCCGTGA CCGCGCCGGC ATCCGCAAGA CGCTCGAAGA GGTCTACGAG
ATGTTCCCGA TCCTGTTCCA GAAGAAGGAC GATCCCGCGG GGTCGCTGTC TGGCGGGCAA
CAGCAAATGG TGGCACTGGG CCGCGCGCTG ATGAGCCGCC CGCGCGCGCT GCTGCTCGAC
GAGCCGTCGC TGGGTCTTGC ACCGCTGGTG GTCAAGCAGA TGTTCGAGAT CATCCAGCGC
ATCAACCGCG CTGGCACCAC CGTGCTGCTG GCGGAACAGA ACGCCTACGC GGCGCTCGGC
ATCGCCCATC GCGCCTACGT GATCGAGAAC GGTCACATCG TGATGGAAGG TGATCGCGAT
ACGCTGCTGA AGGATGAGGG GATCAGGAAG GCGTACATCG GCGGGTAA
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| Protein sequence | MLQLDRVSLS YGSFRALDNI SLHAGAGELV VLLGANGAGK SSIFLAMSGI HRISGGSMRF
DGRELSGMKP SQIVQAGLVH CPEGRKLFPA MSVEKNLTLG AYVHRRDRAG IRKTLEEVYE
MFPILFQKKD DPAGSLSGGQ QQMVALGRAL MSRPRALLLD EPSLGLAPLV VKQMFEIIQR
INRAGTTVLL AEQNAYAALG IAHRAYVIEN GHIVMEGDRD TLLKDEGIRK AYIGG
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