| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3918 |
|---|
| Symbol | |
|---|
| ID | 4040771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 466807 |
|---|
| End bp | 468120 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637979337 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586055 |
|---|
| Protein GI | 94312846 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5361] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.991862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATC CTGCTTCCCC GATGTTCCCC GCGCCCGTCC ACACCAGCCC GCAGGAGGCG
ATGGTTGCCG CCGCGGCGCT ACCACTGGTG ATTTATGGCT ATCCGCTGAT CGAAACGCTG
CGCACCTGCC GCCTGCAGAC TTCTGTCGAT GCGCCCACGC GCTATGGCCG CGCCCCGATG
AACATGCTGT CCGCCAGCGC ACGGCAATGG ACCCACGAGG ACAGGGACAT CGTCACACCG
GCCAATGACC TGCTGTACTT CTGCGGCTGG CTGAACCTGG CAGATGGTCC GGCAACGATT
CGCGTGCCCG CATTGCCGGA CGCGGACCGC TACTACGTGA TCGAACTGCT GGACGCGCAC
ACGAACAACT TCGCCAACCT TGGGCCGCGC AACGTACCAA AGGAGGGCGC CGATATCGAG
ATCGTCGGCC CCGGCCAGCG CGGCAGCGGC GGACAGACCG TGGAGTCGCC GACATCGCTC
GTCTGGATCA TCGGGCGGGT CCTCGTGACC GGCGCCGATG ACCTCGCGCG TGCCTATGCG
TTCGAACAGG GCTTCCAGAT GGTGAAGAGC GCGGGCCCGG CGCAGCCGCC GAGCGTGGCC
CAGTGGCAGG AAAGCGACGA CGAAGCCGTC GACTTCTTCC AGAATCTCTA TCGCGCCATG
CGCGATTTCC CGCCCACGCA GCAGGAACTG GGGCTGTTCA CCTTGCTGCG CAAGGTCGGG
CTGCGCCTCG AGGATGATCC GGACATCGGC TCGATGCGCC CGTCGATCGT CAACGGCCTG
CGCAGCGCCT ACGCGCAAGC CATGGCGCTG ATCGAAGCGC ATACCCGCAG CCAGGGACAC
AAGGCGTGGG GATACAGCCT GCGACTGGGC ACCTATGGCG ATGACTGGCT GCTGCGCGCC
TGCACGGCGA TGAAGGGGCT GGGTGCCTTG CGCGCCGATG AAGCGGTGTA CGCCATGGCC
GATTTCGATG CCGATGGCGA ACGGCTCCAC GGCAACCAGG CATACGAACT GCGCTTTCCG
CCTGGCATGC TGCCGCCGGC CGATGCATTC TGGTCCGTCT CGCTCTATGG CGAGGACCGC
TTTTTCACGG CCAACGAACT GGGGCGCTAC GCCGTGGGCG ATCGCACGCC CGGACTGCGC
AAGGAGCCGG ACGGCACGCT GGTGATTCCC ATCGGCCATG CCCGACCGGC GGAAGACGCC
AACTGGCTGC CCGCGCCGTC GAGCCACTTC TATCTGATCC TGCGCCTCTA CCATCCTTCC
GAAGCGTTCC GGGCCGGGCA GTACACGATT CCTGCCGTGC GCCGCGTCGG CTGA
|
|---|
| Protein sequence | MNHPASPMFP APVHTSPQEA MVAAAALPLV IYGYPLIETL RTCRLQTSVD APTRYGRAPM
NMLSASARQW THEDRDIVTP ANDLLYFCGW LNLADGPATI RVPALPDADR YYVIELLDAH
TNNFANLGPR NVPKEGADIE IVGPGQRGSG GQTVESPTSL VWIIGRVLVT GADDLARAYA
FEQGFQMVKS AGPAQPPSVA QWQESDDEAV DFFQNLYRAM RDFPPTQQEL GLFTLLRKVG
LRLEDDPDIG SMRPSIVNGL RSAYAQAMAL IEAHTRSQGH KAWGYSLRLG TYGDDWLLRA
CTAMKGLGAL RADEAVYAMA DFDADGERLH GNQAYELRFP PGMLPPADAF WSVSLYGEDR
FFTANELGRY AVGDRTPGLR KEPDGTLVIP IGHARPAEDA NWLPAPSSHF YLILRLYHPS
EAFRAGQYTI PAVRRVG
|
|---|
| |