| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3881 |
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| Symbol | ompR |
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| ID | 4040575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 425609 |
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| End bp | 426322 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979300 |
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| Product | winged helix family two component transcriptional regulator |
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| Protein accession | YP_586018 |
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| Protein GI | 94312809 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.144601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAGG TGAACCGGAT AATCGTGCTC GATGACGAGG CGGAGCTGCG CAATATGCTG
CAGCGCTTCC TGACCGGGCA TGGCTTTCAC GTGCGTGCGG TGGCGGACGG CAAGCAACTC
AATCGCTACC TGCAGCGCGA ACCGTACGAC CTGCTCGTGC TCGATCTGAT GATGGAGCCA
GAGGATGGCC TCTCGGTCTG CCGCAGGCTT CGTGCCGAGG GCCAGACGCT GCCCATCCTG
ATGCTGACCG CCAAGGGCGA TCCGGCCGAT CGCGTGATCG GGCTCGATAC CGGCGCGGAC
GACTATCTGG CCAAGCCGTT CCTGCCCGAC GAACTGGTGG CCCGCATCCG TGCGTTGCTG
CGCCGCCAGA AGATCGCCGC CGGCGATCCC ACCGTGGCTT CCCAGACGCT GAGCTTTGGC
GAGTTCCGCT TCGATGTCGG CAAGCAGACG CTGACGCGCG CGGGCGTGCC GGTGGAAGTG
CACTCTGCCC AGATGCTGCT GCTCCAGGCG CTGGGCGCTT CGCCAAACCG GCCGGTCAGC
CGTGAGAACC TGCTGGCCCG CGCGCGCGGC CGCGATCATG ACGCGCTCGA TCGCAGTATC
GACGTGCAGA TTCTGAGGCT GCGCCAGATC GTCGAGGAAG ATCCGTCCAA ACCACGCTTC
ATCAAGACGG TTTGGGGGGT GGGATACATG CTGGTGGCCG GCGTGGAGGC GTGA
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| Protein sequence | MEQVNRIIVL DDEAELRNML QRFLTGHGFH VRAVADGKQL NRYLQREPYD LLVLDLMMEP
EDGLSVCRRL RAEGQTLPIL MLTAKGDPAD RVIGLDTGAD DYLAKPFLPD ELVARIRALL
RRQKIAAGDP TVASQTLSFG EFRFDVGKQT LTRAGVPVEV HSAQMLLLQA LGASPNRPVS
RENLLARARG RDHDALDRSI DVQILRLRQI VEEDPSKPRF IKTVWGVGYM LVAGVEA
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