Gene Rmet_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3846 
Symbol 
ID4040540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp389404 
End bp390222 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID637979265 
Productputative methyltransferase ubiE/COQ5 family 
Protein accessionYP_585983 
Protein GI94312774 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.583895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGC ATGGAACAGA CACGGTCTTC GCAGGCTCCG TTCCGGAGTT GTACGACACG 
CTGATGGTCC CGTTGATCTT CGAACCATAC GCGGCGGACC TCGCCGCGCG TGCCGCAGCA
CTCGCGCCAA CACACGTGCT CGAGGTTGCT GCGGGAACTG GCGCGCTGAC ACGGCGGCTG
GCGAGTGACC TGCCCGACGG CACGTCGATC GTGGCCACCG ACCTCAATCG ACCGATGCTG
GATCGCGCCG CCGCCATCGG CACCTCGCGG CCGCTGACGT GGCGGCAGGC CGACGCCATG
CAGCTACCCT TCCCCGACGC AAGTTTCGAT CTGGTGATCT GCCAGTTCGG GGCGATGTTC
TTTCCCGAGA AGCACAAGGC TTTCGCCGAA GCGCGCCGTG TGCTGAAGCC CGGGGGCGTG
CTGCTTTTCA ACGTGTGGGA TCGCATCGAG GAAAACGCGT TCGCGCATAC GGTAACGCAA
ACGCTGACCG GCATGTTTCC GCACAAGCCG CCTGTGTTTC TCGCACGCAC GCCTCATGGT
TATCACGACC CGGCGGTCGT GGCGGCCGAT CTGAGGCTCG GAGGCTTTTC CGAAGCCTCC
ACATGCGCAA CCGTCGCCGC CGAAAGCCGT GCCGTGGACG CCAACACGCC TGCCATCGCC
TTCTGCCAGG GAACGCCGCT ACGCGGCGAA CTGGAGGCAT TCGGCCCCGA TGCGCTGGTG
AATGCCACGC TCGCCTGTGC GAAGGCGCTG ACGAGGGAGT TCGGCCCCGG TCCGGTTAGC
GGGAAGATTC AGGCGCACGT GTTCAGCGCC AGGGCTTGA
 
Protein sequence
MTSHGTDTVF AGSVPELYDT LMVPLIFEPY AADLAARAAA LAPTHVLEVA AGTGALTRRL 
ASDLPDGTSI VATDLNRPML DRAAAIGTSR PLTWRQADAM QLPFPDASFD LVICQFGAMF
FPEKHKAFAE ARRVLKPGGV LLFNVWDRIE ENAFAHTVTQ TLTGMFPHKP PVFLARTPHG
YHDPAVVAAD LRLGGFSEAS TCATVAAESR AVDANTPAIA FCQGTPLRGE LEAFGPDALV
NATLACAKAL TREFGPGPVS GKIQAHVFSA RA