Gene Rmet_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3823 
SymbolphaZ 
ID4040658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp365240 
End bp366364 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content71% 
IMG OID637979244 
Productpoly(3-hydroxybutyrate) depolymerase 
Protein accessionYP_585962 
Protein GI94312753 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGC GCACGGGCGG TACCAGGCTG TTGGCAACGT TGGGCAAGCA GGCGGCGCGC 
AGCGCGCGCC GGCTGCAGCG CACCGTGGCG CAGACAGTGA CGGATCCGGT GCTGCGCGTG
GCCAGGCAGC AGGGCCAGGC GGTCAGCAAG GCCATGGGGC GTGCCGTTGG CAAGGCCGCG
CGTCAGGCCT TCACAGGGGT AGTGACTCCG GCCCCAACCC CGGTCAGCAA GGGCGGCGGT
ATCTGGGAGG AGGGGCTGTG GGGCTTCAGC CTCGGTATCG GCAGCATGGC GCAGCGCCGC
TATCGCGTGT TTGTGCCGCC CGGTGTCAGC GCGGCGCGGC CAGCGCCGCT GCTGGTGTTG
CTGCACGGCT GCGGCCAGGA TGCCGCCAGC TTCGCGGCCT GCGCCCGCGT GGCCACCGTG
GCGCGCGACG CGCGCTGGGT GGTGCTGATG CCGGAGCAAT CGCTGCAAGG CAACGCCCAG
CGCTGCTGGA ACTGGTTCCG GCCCGCTGAG CGCGGCGCAT CGGAGGCGGC GCTGCTGATG
TCGATGGTCG ATCATGCGTG CCGGCGCTAC GCGGTTCTGG CCGACCGGGT TTGCGCGTTC
GGTTTGTCTG CTGGCGGCGC CATGGCGCTG ATGCTGGGTC TGCGCTATCC CGATCGCTTT
GCCGCCGTGG GTTCGCATTC CGGTGCCGCG CCGCTCAGTG CCAGCAACGC GTCGCAGGCG
TCACGCGCGA TGCGCGGGGA GCGGGCGCCT GACATCGATG CGGCGCGGTT GCTGCTGGCC
GGACGTCGGC CTCCGCCGCT GCTGCTGGTG CATGGCGACG AGGACGCGAT GGTGTCCTAC
GACAACGCAA CGGCTACGGC TGCCATGTGG CTCGACCTCG TCCCACATGG CGTGCATGCA
CCTGCCCCGT TGCCGCCAAA GCACGTGCGC CGCGGCACGC GCAGGGAGAT GGACGTGCTC
GACTGGCAGA GCGGGGCGCG CCCGTACCTG CGGCTGGTAA AGGTGGAGGG TCTGCGTCAC
GCCTGGAGCG GTGGCGCGCC GGGGCAGGCG TTCGCCGACC CCGCCGGCCC CGATGCACTC
AAGATCGCGC TACGGTTCTT TTCGGTGAAC GGTCGTCACG ATTGA
 
Protein sequence
MKRRTGGTRL LATLGKQAAR SARRLQRTVA QTVTDPVLRV ARQQGQAVSK AMGRAVGKAA 
RQAFTGVVTP APTPVSKGGG IWEEGLWGFS LGIGSMAQRR YRVFVPPGVS AARPAPLLVL
LHGCGQDAAS FAACARVATV ARDARWVVLM PEQSLQGNAQ RCWNWFRPAE RGASEAALLM
SMVDHACRRY AVLADRVCAF GLSAGGAMAL MLGLRYPDRF AAVGSHSGAA PLSASNASQA
SRAMRGERAP DIDAARLLLA GRRPPPLLLV HGDEDAMVSY DNATATAAMW LDLVPHGVHA
PAPLPPKHVR RGTRREMDVL DWQSGARPYL RLVKVEGLRH AWSGGAPGQA FADPAGPDAL
KIALRFFSVN GRHD