| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3815 |
|---|
| Symbol | |
|---|
| ID | 4040650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 355801 |
|---|
| End bp | 357423 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979236 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_585954 |
|---|
| Protein GI | 94312745 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGA CCGCCACCGC TGTTATCTCG ACCCGTCCCT CGACACCCCA CCCACGCCGG
AAACGGACAT GGATGCGAGC CGCGTTATGC GCCTGGTTCA TCGGCGCCGC GACGTCCGCC
TGGGCGCAGC CACTGTGGTT TGCCAATGGA CGCCCGACGC AAGCCGCGCA GCAGGCCGTG
GCCGCGCTGG CGGATGCGGG CGCGGATGGG CTGGAACCCC GAGATTACGA CGCGGACGGC
CTCAAGCGGG CCATCGCGCA GGCCGACTCC GGCACGGCCC TGGCTCCGGA GTCGTTGGAT
CGGGTGGACA ATGCGCTGAC TGTGGCGATG CGCCAGTACC TGTCGGACCT GCACAAGGGG
CGGATCGACC CGCGCCAGAT CCACGTGAAC TTCTCGGTAG CGGACGAAAC ACCGTTCGAC
CCCGACAGCT ATCTGCACGC CGCCGTCGCC GCGAACCGGC TGCCCGCGGC GATTCACGAG
GCGGCGCCAT CGTTCCCGCT GTATCCGACG CTGCGCGACG CGCTGAGCCG CTATCGGGCC
CTGGCCACCC AGCCGCTCTG GAACACCCCG CTGCCGACGC CACCGGGCAA CAAGCTGGCC
ATCGGGCAGC CCTATGACGG GCTTGCGCAA ATGGCGCAGC GCCTGGAGGC ATTGGGCGAT
CTGCCCCAAG GCACGCCGGT TCCGAAAAAG TACGAAGGCG CGCTGGTGAC CGCGGTCGAG
TCATTCCAGA AGCGGCATGG TCTAGATGCC GACGGCGTCA TCGGACAAGG CACGCTGGCG
CAACTCAACA CAACACCGTC CGAACGCGTG AAGCAGATCG CGCTGACGAT GGAGCGCCTG
CGCTGGACAC CGTTGACGGC AGGCCCCCGC GTCATCGTCG TCAACATTCC CGAGTTCATG
CTGCGCGCCT ATGATTACGT CGACGGAAAG CTGGACATCA AGCTGGAGAT GAAGGTCATC
GTCGGCAAGG CGCTCAACAC CCGCACGCCG ATGTTCCGCG AGGACATGCG CTATATCGAG
TTCAGCCCGT ACTGGAACGT GCCGCCATCC ATCGCGCGCA GCGAAGTGGT CCCGAAATCG
CGACGCGATC CCGGGTATTT CACGCGACAG GGCTTCGAGT TCGTCTCGGG TGGCCAGGCG
ATTACCACGC TGTCGTCGGC CAATCTCGAT GCGGTGCTGA ACGGCCAGAT GCGCATCCGG
CAACGGCCCG GCCCGTTGAA CGCGCTGGGG GACATCAAGT TCGTCTTCCC GAACAATCAG
AACATCTATC TGCACCACAC ACCGACCCCG CAATTGTTCC AGCGCGGCCG CCGCGATTTC
AGCCACGGCT GCATCCGCGT GGAGGAGCCG GTGCAGTTGG CGAAGTTCGT GCTGCAGGAC
ATGCCCGAGT GGACCGAGGA GCGGATCCGG CAGGCGATGA GCAAGGGAAA GTCCAACACA
ATTGCGTTGA AGCAGCCTTT GCCTGTTGTA TTGGCGTACG GCACCGCCAT TGCCAGGGCC
GATGGACGGG TATATTTTCT GCCTGATATC TACGGACAGG ACAAGCTGCT GGAGCAGGCG
CTGCGGCAGC GCAACCCGCC GGCCACCGCA CGCGCCGGCA AGCTCGCGCA GACCACACCA
TGA
|
|---|
| Protein sequence | MPMTATAVIS TRPSTPHPRR KRTWMRAALC AWFIGAATSA WAQPLWFANG RPTQAAQQAV
AALADAGADG LEPRDYDADG LKRAIAQADS GTALAPESLD RVDNALTVAM RQYLSDLHKG
RIDPRQIHVN FSVADETPFD PDSYLHAAVA ANRLPAAIHE AAPSFPLYPT LRDALSRYRA
LATQPLWNTP LPTPPGNKLA IGQPYDGLAQ MAQRLEALGD LPQGTPVPKK YEGALVTAVE
SFQKRHGLDA DGVIGQGTLA QLNTTPSERV KQIALTMERL RWTPLTAGPR VIVVNIPEFM
LRAYDYVDGK LDIKLEMKVI VGKALNTRTP MFREDMRYIE FSPYWNVPPS IARSEVVPKS
RRDPGYFTRQ GFEFVSGGQA ITTLSSANLD AVLNGQMRIR QRPGPLNALG DIKFVFPNNQ
NIYLHHTPTP QLFQRGRRDF SHGCIRVEEP VQLAKFVLQD MPEWTEERIR QAMSKGKSNT
IALKQPLPVV LAYGTAIARA DGRVYFLPDI YGQDKLLEQA LRQRNPPATA RAGKLAQTTP
|
|---|
| |