| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3729 |
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| Symbol | icdA |
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| ID | 4040700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 271791 |
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| End bp | 274034 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979152 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_585870 |
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| Protein GI | 94312661 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC AGCAGCCAAC CATCATTTAC ACCCTAACCG ACGAAGCTCC GCTGCTGGCC
ACCAGTGCCT TCCTGCCCAT CATCCGCACG TTCGCTGGCC CGGCCGGCGT GAACGTCGTG
ACCAGCGACA TCTCGGTCGC TGGCCGTATC CTGGGCGAAT TCCCCGAATT CCTGACCGAA
GCACAGCGTG TGCCGGACAA CCTGGCCGAA CTGGGCAAGC TCACGCAAGA CCCGGACACC
AACATCATCA AGCTGCCGAA CATCAGCGCC TCGGTGTTCC AGCTCGTCAG CGCGATCAAG
GAACTGCAGT CGAAGGGCTA CAAGATCCCC GACTTCCCCG AAGATCCGAA GACCGAAGAA
GAGAAGGCCA TCCAGAAGCG CTACTCGAAG TGCCTGGGCA GCGCCGTGAA CCCGGTCCTG
CGCGAAGGCA ACTCGGACCG CCGCGCGCCT GCCGCCGTCA AGAACTACGC GCGCAAGCAC
CCGCACAGCA TGGGCGAGTG GAGCATGGCC TCGCGCACGC ACGTCGCCCA CATGAAGCAC
GGCGACTTCT ACCATGGCGA GAAGTCGATC ACGCTGAACG GCGCACGCGA AGTCCGCATG
GAACTGCTGA CCAAGAGCGG CAAGACCATC GTGCTGAAGC CGAAGGTCGC GCTGCTGGAC
GGCGAAGTCA TCGACAGCAT GTTCATGAGC AAGAAGGCCC TGCTGGACTT CTATGAAGAC
CAGATGGAAG ACGCGCGCAA GACCGGCGTC ATGCTGAGCT TGCACGTGAA GGCGACGATG
ATGAAGGTGT CGCACCCGAT CGTGTTCGGC CACGCCGTCA AGGTCTTCTA CAAGGATGCG
TTCGCCAAGC ACCAGAAGCT GTTCGACGAA CTGGGCGTGA ACGTCAACAA CGGCCTGGTC
GACTTGTACA CCAAGATCGA AACGCTGCCG GAATCGAAGC GCGAGGAAGT CATCCGCGAC
ATGCACGCCT GCCACGAACA TCGCCCGGAA ATGGCGATGG TAGACTCGGC CAAGGGCATC
TCGAACCTGC ACGCGCCGAA CGACGTGATC GTCGACGCAT CGATGCCGGC CATGATCCGT
ATCGGCGGCA AGATGTGGGG CGCGGACGGC CGTACGAAGG ACACCAAGTG CCTGATTCCG
GAATCGACTT TCGCCCGCAT CTATCAGGAA ATCATCAACT TCTGCAAGAC CAACGGCGCG
TTTGATCCGG TGACGATGGG CACGGTGCCG AACGTCGGCC TGATGGCCCA GAAGGCCGAA
GAGTACGGTT CGCACGACAA GACGTTCGAG ATTCCCGAAG ACGGCGAAGC CCGCATCGTC
GACAACGCCA CCGGCGAAGT GCTGACCGCC CTGACGCAGC AGGTTGAAGC AGGCGACATC
TGGCGCATGT GCCAGGTCAA GGACGCCCCG ATCCGCGACT GGGTGAAGCT GGCCGTTACG
CGCGCCCGCA ATTCGGGCAT GCCTGCCGTG TTCTGGCTGG ACCCGTACCG TCCGCACGAG
GCCGAGCTGA TCAAGAAGGT GGAAACGTAC CTGAAGGACT ACGACACCAA CGGCCTGGAC
ATCCAGATCA TGTCGCAGGT TCGCGCCATG CGCTACACGC TGGAACGCGT GATCCGCGGC
CTGGACACCA TCTCGGTGAC CGGCAACATC CTGCGCGACT ACCTGACCGA CCTGTTCCCG
ATCATGGAAC TGGGTACCAG CGCCAAGATG CTGTCGATCG TGCCGCTGAT GGCAGGTGGC
GGTATGTACG AAACCGGCGC GGGCGGTTCG GCACCGAAGC ACGTCGCGCA GCTGGTGGAA
GAGAACCATC TGCGTTGGGA CTCGCTGGGT GAATTCCTGG CCCTGGCCGT GTCGCTGGAA
GAGTTGGGCA TCAAGTCCGG CAACGAACGC GCCAAGATCC TGGCCACGAC GCTGGACGCC
GCCACCGGCA AGCTGCTGGA CAACGCCAAG AGCCCGTCGC CGAAGACCGG CCAGCTCGAC
AACCGCGGCA GCCAGTTCTA CCTGGCCATG TACTGGGCCC AGGAACTGGC CGCGCAGAAG
GGCGACGCCG ATCTGGCGAA GATCTTCGCG CCGCTGGCCA AGACGCTGAC GGACAACGAG
TCGACCATCA TCGGCGAACT CGGCGCTGTG CAGGGCAAGC CGGTGGACAT CGGCGGCTAC
TACATGCCGG ACGCCGCCAT GCTGGAAGCC GTGATGCGCC CGAGCCAGAC GCTGAACTCG
GCGCTGGCGG CAGTGAAGGC CTAA
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| Protein sequence | MSNQQPTIIY TLTDEAPLLA TSAFLPIIRT FAGPAGVNVV TSDISVAGRI LGEFPEFLTE
AQRVPDNLAE LGKLTQDPDT NIIKLPNISA SVFQLVSAIK ELQSKGYKIP DFPEDPKTEE
EKAIQKRYSK CLGSAVNPVL REGNSDRRAP AAVKNYARKH PHSMGEWSMA SRTHVAHMKH
GDFYHGEKSI TLNGAREVRM ELLTKSGKTI VLKPKVALLD GEVIDSMFMS KKALLDFYED
QMEDARKTGV MLSLHVKATM MKVSHPIVFG HAVKVFYKDA FAKHQKLFDE LGVNVNNGLV
DLYTKIETLP ESKREEVIRD MHACHEHRPE MAMVDSAKGI SNLHAPNDVI VDASMPAMIR
IGGKMWGADG RTKDTKCLIP ESTFARIYQE IINFCKTNGA FDPVTMGTVP NVGLMAQKAE
EYGSHDKTFE IPEDGEARIV DNATGEVLTA LTQQVEAGDI WRMCQVKDAP IRDWVKLAVT
RARNSGMPAV FWLDPYRPHE AELIKKVETY LKDYDTNGLD IQIMSQVRAM RYTLERVIRG
LDTISVTGNI LRDYLTDLFP IMELGTSAKM LSIVPLMAGG GMYETGAGGS APKHVAQLVE
ENHLRWDSLG EFLALAVSLE ELGIKSGNER AKILATTLDA ATGKLLDNAK SPSPKTGQLD
NRGSQFYLAM YWAQELAAQK GDADLAKIFA PLAKTLTDNE STIIGELGAV QGKPVDIGGY
YMPDAAMLEA VMRPSQTLNS ALAAVKA
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