| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3726 |
|---|
| Symbol | |
|---|
| ID | 4040697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 268591 |
|---|
| End bp | 269181 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637979149 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_585867 |
|---|
| Protein GI | 94312658 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5608] Conserved secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGG CCCCGTCGCC ACATGACTTC GCTATTCCAT ATGCCGGGTC TCGCCGGAAG
CACTACACTA ATCCTCACCC GCAGACTCTC CAGACGAGGC CCACCATGCA GGCTCCCGAC
ACACGGCGTT CCATTCGCCT CTACGTCCTC TGCCTTTGCA TCCTTGCCTG GCTCGGCGGC
TGCGCGGCGC TGACGGGTCA GGAACCGCTG CGGGTTGCCG TGGCTGGTGT CGAACCGATA
CCGGGCGAAG GGCTGGAGAT GCGCTTCAAC GTCAAACTGC GCATCCAGAA TCCCAACGAT
GCGCCGATCG AATACAACGG GGTGTCACTG GAACTGGACC TGAACGGCCA GTCCTTCGCC
AGCGGTGTCA GTGACCAGAG TGGGACCGTA CCCCGGTTCG GCGAAACGGT GATCGACGTG
CCATTGACCG TCCCCGCGTT CTCCGCCGTG CGTCAGGCGT TCGCCTTCGC CGGCGGTGTG
AGTTCGGGCA ACATTCCATA TGAAGTGCGC GGACGACTGG CAGGCGGCTT TGCTGGCGGC
ACGCGCTTCA CCGATCATGG AAAGCTGTCG CTGCCGACAG GGGGCACTTG A
|
|---|
| Protein sequence | MRQAPSPHDF AIPYAGSRRK HYTNPHPQTL QTRPTMQAPD TRRSIRLYVL CLCILAWLGG
CAALTGQEPL RVAVAGVEPI PGEGLEMRFN VKLRIQNPND APIEYNGVSL ELDLNGQSFA
SGVSDQSGTV PRFGETVIDV PLTVPAFSAV RQAFAFAGGV SSGNIPYEVR GRLAGGFAGG
TRFTDHGKLS LPTGGT
|
|---|
| |