Gene Rmet_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3652 
Symbol 
ID4040468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp186633 
End bp187094 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content67% 
IMG OID637979075 
Productputative tight adherence (TadE/G) protein 
Protein accessionYP_585793 
Protein GI94312584 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTAA GGGGGAAAGC GGACGGGCGT CGCGCGAAGG GCATCGCGGC GCTCGAGTTC 
GCCATCGTTG CACCGTTGTT CCTGACGCTC GTACTGGGTA TCACGTACTA CGGCACGGTG
TTCGTCTTGC AGCAGGCGCT GACGCTCGCG GCCGAAGAAG GCGCGCGGGC TGCCTTGCGT
TATCCGCTCA CCTCGACCGG GGGCACCACC GCCTCCACGC TTGATCTTCG CGTTGCTGCC
GCCGCGCAGA CCGCGCGCGC GATGCTGCCG ACGTCGATGT CCTCGCTGAT CTCGTCCGCG
AACGTCGCCC AGCCCGTGAC ATGCGCGTCC CCGTCCGGCA CGCAGTGCGT GCAGGTGACG
CTGAGCCTGC CAACCCGATC GATCCTGCCA TCGGTGCCAA TGGTGCCGGT GCCGGCTGTG
CTGACTGGTT CGGCGATGGT CCAGCTATCT CCCGACATCT GA
 
Protein sequence
MHLRGKADGR RAKGIAALEF AIVAPLFLTL VLGITYYGTV FVLQQALTLA AEEGARAALR 
YPLTSTGGTT ASTLDLRVAA AAQTARAMLP TSMSSLISSA NVAQPVTCAS PSGTQCVQVT
LSLPTRSILP SVPMVPVPAV LTGSAMVQLS PDI