| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3610 |
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| Symbol | trmE |
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| ID | 4040459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3921381 |
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| End bp | 3922808 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979028 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_585751 |
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| Protein GI | 94312541 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTAT CCCAGATTCC CATCGCCGCG ATTGCCACCG CGCCTGGCCG TGGCGGCATC
GGCGTCGTGC GTGTTTCCGG CCCCGATGTC GGCGCCGTGA TGCGCGCCGT ATGCGGCCGC
GCGCTGCAGC CACGTCACGC CACCTATCTG CCGTTTCTCG ATGCGCGTGG CAATGTCATC
GATCATGGCC TCGCGCTCTA CTTCCCGGCA CCGAATTCGT ACACCGGCGA GGAAGTGCTT
GAGTTGCAGG GCCATGGCGG ACCGGTGGTG ATGCAGATGC TGCTGTCGCG CTGCCTCGAG
GCCGGCAAGG ACATCGGCCT GCGTGTGGCC GAGCCGGGCG AGTTCACACG ACGCGCGTTC
CTCAACGACA AGCTCGACCT CGCGCAGGCC GAGGCCGTGG CGGATCTGAT CGAAGCAAGC
ACGGAGGCCG CGGCGCGGTC TGCGGCGCGG TCCATGGAGG GAGAGTTCTC CAAGGCAATC
CACGCGCTTG TGGAAAAAGT CATCCACCTG CGAATGCTGG TGGAAGCCAC GCTGGACTTT
CCCGAAGAGG AGATCGATTT CCTCGAGGCC TCCAATGCAC GCGGCCAGCT GACACGCATT
CGCGAAGATC TCGCGGGCGT CCTCAAGCAG GCGCGGCAGG GCTCATTGCT GCGTGAAGGA
TTGTCGGTGG TTCTGGCCGG ACAGCCCAAT GTGGGCAAGT CCTCGCTGCT CAATGCGCTC
GCCGGCTCGG ATCTCGCCAT CGTCACGCCA ATTGCCGGCA CCACGCGCGA TCGCGTGCGC
GAGACGATCC AGATAGACGG CATCCCGCTG CACATTATCG ACACCGCAGG TCTGCGCGAC
GATGCCGCCG ACGAAGTGGA ACGCATCGGC ATCGAGCGCA CATGGGAAGC CATCCGCCAC
GCCGATATCG TGCTGCATCT GATCGACGCG GCGGACTACA TCGAGCATGG CATTTCGGAG
ACCGATGACC ATATCGACGA TCGCCTGAGC GGCCAGTTGC CCCCCGGGTC TCCAATCGTT
CGCGTCATCA ACAAGATCGA CCTCGCGCCA TCCGTCGGCG CGATGGGATT TGGCGGCAAC
CGCCCGCATG TGGTGGCGGC CAATGGGCCA AACCCGACCG AGATCTGGAT CTCCGCACGC
ACCGGCGCGG GCATCGACCT GATGCGCAGC GAACTGCTGC GCCTGATCGG CTGGCAGTCC
GGCAATGAAG GCGCGTTCCT GGCGCGGGAG CGCCATCTCA TCGCGCTGCG CAACGCGGAA
TCGCACCTCG AACTCGCCGA GGCCAGCGCC TCGCAGCACG CCCAGGCGCT GGATCTATTC
GCGGAGGAAC TGCGGCTGGC ACAGGATCAC CTGAACAGCA TCACTGGAGA GTTCACGAGC
GATGACCTGC TGGGGACAAT TTTCACGCGG TTCTGCATCG GGAAGTGA
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| Protein sequence | MTVSQIPIAA IATAPGRGGI GVVRVSGPDV GAVMRAVCGR ALQPRHATYL PFLDARGNVI
DHGLALYFPA PNSYTGEEVL ELQGHGGPVV MQMLLSRCLE AGKDIGLRVA EPGEFTRRAF
LNDKLDLAQA EAVADLIEAS TEAAARSAAR SMEGEFSKAI HALVEKVIHL RMLVEATLDF
PEEEIDFLEA SNARGQLTRI REDLAGVLKQ ARQGSLLREG LSVVLAGQPN VGKSSLLNAL
AGSDLAIVTP IAGTTRDRVR ETIQIDGIPL HIIDTAGLRD DAADEVERIG IERTWEAIRH
ADIVLHLIDA ADYIEHGISE TDDHIDDRLS GQLPPGSPIV RVINKIDLAP SVGAMGFGGN
RPHVVAANGP NPTEIWISAR TGAGIDLMRS ELLRLIGWQS GNEGAFLARE RHLIALRNAE
SHLELAEASA SQHAQALDLF AEELRLAQDH LNSITGEFTS DDLLGTIFTR FCIGK
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