| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3565 |
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| Symbol | def |
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| ID | 4040414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3867045 |
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| End bp | 3867551 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637978983 |
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| Product | peptide deformylase |
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| Protein accession | YP_585706 |
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| Protein GI | 94312496 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 65 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC TCGACATCCT CACCTACCCC GATCCTCGCC TGCACAAAGT GGCCAAGCCC
GTGGAGGTGG TGGACGACCG CATCCGCCAG CTCGTGAAAG ACATGGCCGA AACCATGTAC
GAAGCGCCCG GCATCGGCCT GGCCGCGACG CAAGTGGACG TGCACGAGCG CGTGATCGTG
ATCGACATTT CCGAGAGCCG CGACGAGTTG ATGGTGTTCA TCAACCCCGA GGTCACTTGG
GCCAGCGAGA ACCGCAAGGT ATGGGAAGAG GGCTGCCTGT CGGTGCCCGA AGTCTATGAC
CGCGTGGAGC GCCCGGATCG CGTCAAGGTA CGCGCGCTCG ACGAGAAGGG CGAAGCGTTC
GAGCTCGACG CCGACGATCT GCTCGCTGTA TGTATACAGC ACGAGATCGA TCACCTCGAC
GGCAAGGTAT TCGTGGAATA TCTGTCGCCA CTCAAGCTCC AACGCATCAA GAGCAAGCTC
CAGAAGCGCG TGCGCTCGCG CATGTAA
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| Protein sequence | MAKLDILTYP DPRLHKVAKP VEVVDDRIRQ LVKDMAETMY EAPGIGLAAT QVDVHERVIV
IDISESRDEL MVFINPEVTW ASENRKVWEE GCLSVPEVYD RVERPDRVKV RALDEKGEAF
ELDADDLLAV CIQHEIDHLD GKVFVEYLSP LKLQRIKSKL QKRVRSRM
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