Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3543 |
Symbol | |
ID | 4040391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3841041 |
End bp | 3842180 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637978960 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_585684 |
Protein GI | 94312474 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.568783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGTC GTTCCTTCCT GTTGAAAGCG TCCGCCGTGG CCGCCACCGG AGCGCTCGCC GCTTGCGGCA AGGAAGAAAA GCCCGCCGCG CCGGCAGCAT CGGCCAGCGC CCCAGCCGCC CCTGCTGTCA TCGGCAGCAA CCCGGCAGTG GAATGGCGGA TGGCGTCGAG CTTTCCGAAG TCGCTGGACA CTATCTATGG CGGTGGCGAA CTGCTGGCGC AACGTGTGAA GGAACTGACG GACGGCAAGT TCAATATCAA GGTATTTGCC GCAGGTGAAA TCGTGCCGGG CCTGCAGGTG CTGGACGCCG TGCAGAACCA GACCGTGCAG ATCGGCCATA CCGCCGGCTA TTACTACTTC GGCAAGAACC CGACGCTGTG CTTCGACACG ACGATTCCGT TCGGCCTGAC CGCGCGCCAG CAGAACGCCT GGATGCTGCA GGGTAACGGC ATGAAACTGA TGCGCGAGTT CTTTAAGGAA TACAACGTCG TCAACTTCCT CGGCGGCAAC ACCAATGCGC AGATGGGTGG CTGGTTCCGC AAGGAAATCA AGAGCGTGGC GGATCTGCAG GGTTTGAAGT ACCGCATCGC CGGGTTTGCT GGCGTGGTGC TGTCGCGCCT GGGCGTGGTG CCGCAGCAGA TCGCCGGTGG CGATATCTAC CCGGCGCTGG AAAAGGGCAC GATCGACGCA GCCGAATGGG TGGGCCCGTA CGACGACGAG AAGCTCGGCT TCTACAAGGT GGCGCCGTAC TACTACTACC CGGGATGGTG GGAAGGCAGC GCTCAGCTCT CGTTCTATGC GTCGGCACCC GAGTTCGAGA AGCTGCCCGC GCTGTACAAG CGCGCGCTGG AAACGGCCAC CATCGAGGCC CACACGAACA TGATGGCGAA GTACGACACC GTGAACCCGC AGGCGCTGGC CCGTCTGCTG GAAAACGGCG TGAAGCTGCG TCCGTTCTCG AAGGAAATCA TGGAAGCCTG CTTCAAGGCC ACCCAGGAAG CCTACGCGGA CGAAAGCGCC AAGAACCCGT CGTTCAAGAA GATCTTCGAC GACTGGCGCG TGTTCCGTAA CAACGAAGCC GCGTGGTTCA ACGTGGCCGA GCAGGCATTC TCGCAGTTCA GCTTCGCCCG CAAGCTGTAA
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Protein sequence | MERRSFLLKA SAVAATGALA ACGKEEKPAA PAASASAPAA PAVIGSNPAV EWRMASSFPK SLDTIYGGGE LLAQRVKELT DGKFNIKVFA AGEIVPGLQV LDAVQNQTVQ IGHTAGYYYF GKNPTLCFDT TIPFGLTARQ QNAWMLQGNG MKLMREFFKE YNVVNFLGGN TNAQMGGWFR KEIKSVADLQ GLKYRIAGFA GVVLSRLGVV PQQIAGGDIY PALEKGTIDA AEWVGPYDDE KLGFYKVAPY YYYPGWWEGS AQLSFYASAP EFEKLPALYK RALETATIEA HTNMMAKYDT VNPQALARLL ENGVKLRPFS KEIMEACFKA TQEAYADESA KNPSFKKIFD DWRVFRNNEA AWFNVAEQAF SQFSFARKL
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