| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3521 |
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| Symbol | |
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| ID | 4040369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3812356 |
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| End bp | 3814023 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978938 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_585662 |
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| Protein GI | 94312452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.597773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACGT TCGACTACAT CATCGTGGGT GCGGGTTCGG CGGGTTGTGT GCTGGCCAAC
CGGCTGACGC AGGACAGCGA TGTCAACGTG CTGCTGCTCG AAGCGGGCGG CAAGGACGAC
TATCACTGGA TTCATATTCC AGTCGGCTAT CTCTATTGCA TCGGCAATCC GCGCACCGAC
TGGCTCTATC GCACCGTGGC CGAAGCCGGC CTGAACGGCC GCTCGCTCGG CTATCCGCGT
GGCCGTGTGC TGGGCGGGTC ATCGTCGATC AACGGCATGA TCTACATGCG TGGCCAACGC
GAGGACTACG ACGACTGGGC ACGCATCACT GGCGATGACG GCTGGCGCTG GGACAACGTG
CTGCCGTTCT TCAAACGCAG CGAGGACCAT CACCGTGGCG CGAACGAGTT CCACGGGGCC
GGCGGCGAAT GGCGCGTGGA AGCGCAGCGG CTGCGCTGGG AAATCCTCGA GTGCTTCATC
GAGGCCGCCG AGCAGGCTGG CATTCCCCGT ACCGACGATT TCAATCGTGG CGACAACTTC
GGCGTGGGAT ATTTCGAGGT CAACCAGCGT CGCGGCATTC GATGGAATAC GTCGAAGGCG
TTCCTGCGCC GTGCGGCGGA ACGGCCCAAC CTGACCATCG TCACCGGCGC GCAGGTCAGC
GCGTTGACGT TCGATAGCCC GGACGGCCTG CGCTGCACCG GCGTGCAATA CCTGGGCGGT
GGCCAGCCCC ACGAGGCGCG CGCGAAGCAG GAGGTGATAC TTGCTGCCGG CGCGATTGGC
TCGCCGCAGT TGCTGGAGCT CGCGGGCATC GGCCAGCCAG ACCGGCTGCA GGCGCTGGGC
ATCCGCGTGC GCCACGCGCT GCGCGGTGTG GGCGAGAATC TGCAGGATCA CCTGCAGTTG
CGTTCGGTGG TCAAGGTCCA GGGCGTGCGC ACGCTCAACA CGCAGGCGGC GCATTGGTGG
GGCAAGCTTG GCATCGGCCT GCAATACGCC TTCAACCAGA GCGGGCCGAT GAGCATGGCG
CCGTCGCAAC TCGGCGCGTT CGCGCGCAGC GATCCGGAGC AGCCTCGCGC CAATATCGAA
TACCACGTGC AGCCGCTGTC GCTGGACAAG TTCGGCGATC CATTGCACAG CTTCAATGCC
TTCACGGCGA GCGCCTGCAA TCTGCGCCCC ACGTCGCGCG GCAGCGTGCA TATCGAAGAC
ACCGATTTCC GTCGCGCGCC ATTGATCGCG CCGAACTATC TGTCCACCGA GGAAGACCGC
AAGGTCGCCG CCGATTCGAT CCGCCTGACG CGGCGCATCG TGTCTTCGCC GGCATTGGCG
CGCTACAAGC CGCAGGAGTA TCTGCCCGGC GCAACATTCC AGACCGACGA GGAACTGGCG
GAAGCTGCTG GCGCGATCGG CACGACAATT TTCCATCCCG TCGGCACTTG CCGCATGGGT
GGCGCGGACG ATGCCGACGC CGTCGTCGAC AACCGCCTTC GCGTGCGGGG CATCAGTGGT
CTGCGCGTGG TCGATGCGTC GGTGATGCCG TTGATCACGT CCGGCAATAC GAACTCGCCG
ACGATCATGA TTGCCGAGCG CGCCAGCGAT ATGATCCGCG CGGATCGCAA GGCAAGCGCT
GGTAATCCGG ACATCGTCAC GGCGCCGTCA CCAGCAGTCA CTGCATAG
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| Protein sequence | METFDYIIVG AGSAGCVLAN RLTQDSDVNV LLLEAGGKDD YHWIHIPVGY LYCIGNPRTD
WLYRTVAEAG LNGRSLGYPR GRVLGGSSSI NGMIYMRGQR EDYDDWARIT GDDGWRWDNV
LPFFKRSEDH HRGANEFHGA GGEWRVEAQR LRWEILECFI EAAEQAGIPR TDDFNRGDNF
GVGYFEVNQR RGIRWNTSKA FLRRAAERPN LTIVTGAQVS ALTFDSPDGL RCTGVQYLGG
GQPHEARAKQ EVILAAGAIG SPQLLELAGI GQPDRLQALG IRVRHALRGV GENLQDHLQL
RSVVKVQGVR TLNTQAAHWW GKLGIGLQYA FNQSGPMSMA PSQLGAFARS DPEQPRANIE
YHVQPLSLDK FGDPLHSFNA FTASACNLRP TSRGSVHIED TDFRRAPLIA PNYLSTEEDR
KVAADSIRLT RRIVSSPALA RYKPQEYLPG ATFQTDEELA EAAGAIGTTI FHPVGTCRMG
GADDADAVVD NRLRVRGISG LRVVDASVMP LITSGNTNSP TIMIAERASD MIRADRKASA
GNPDIVTAPS PAVTA
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