| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3482 |
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| Symbol | |
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| ID | 4040330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3763331 |
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| End bp | 3766255 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978899 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_585623 |
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| Protein GI | 94312413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CGCTCCCCAT GAACGCTGCC GCCCAAGGTG CCCGGCCCAC GCTGGCCGAA
CTGGAGGCGC GCGACGCCTT CGCCGCCCGT CATATCGGCC CCGATTCCGC CGAACAGCAA
CACATGCTCA AGGTGCTCGG CTTCGAGAGC CGCGCCGCGC TGATCGACGC CGTGGTGCCC
GCCGCGATCC GCCGCCGTGA CGGCATGTCG CTGGGCGAAT TCACCGCACC GCTGACCGAG
GAGGCCGCGC TCGGCCGCCT GCGCGCGCTG GCGGGCAAGA ACCGCGTGCT CAAGAGCTTC
ATTGGCCAGG GCTACTACAA CACGCTCACG CCGGGCGTCA TCCTGCGCAA CATCTTCGAG
AACCCGGCGT GGTACACCGC GTACACGCCG TACCAGCCCG AAATCTCGCA AGGTCGTCTG
GAAGCGATGC TGAACTTCCA GCAGATGATC ACTGACCTGA CCGGCCTGGA TATCGCCAAC
GCGTCGATGC TCGACGAAGG CACCGCTGCC GCCGAGGCGA TGACGCTGCT GCAGCGCGTG
AACAAGCACG CCTCGAACAC GTTCTACGTG GCTGAAGACG TCCTGCCGCA AACGCTGGAA
GTGGTTCGCA CGCGCGCCCT GCCGCTCGGC ATCGAGGTCA AGGTCGGCCC CGCCGCCGAC
GCCGCGCAGG CCCATGCCTT TGGCGTGCTC CTGCAGTACC CGGGCGTCAA TGGCGATGTG
GCCGACTACC GCGCGATTGC CGAAGCCGTG CACGCCTCCG GTGGCCGCGT CGTGGCCGCT
GCCGACCTGC TGGCGCTGAC GCTGATCGCC GCGCCGGGCG AATGGGGCGC CGACGTGACC
GTGGGCAACT CGCAGCGCTT TGGCGTGCCG CTCGGCTTCG GTGGCCCGCA CGCGGGCTAC
ATGGCCGTGA AAGATGAATT CAAGCGCTCG ATGCCGGGCC GTCTGGTCGG CGTGACGATC
GACGCGCAAG GCAACAAGGC CTATCGTCTG GCGCTGCAGA CGCGCGAACA GCACATCCGC
CGCGAGAAGG CCACGTCGAA CATCTGCACG GCGCAGGTCT TGCTGGCCGT GATGGCGTCG
ATGTACGCGG TCTACCATGG TCCACAGGGC CTCAAGCGCA TCGCCCAGCG CGTGCATCGC
CTGACCGCCA CGCTGGCCGC CGGCCTGAAG ACGCTGGGGC ATACGCCGCT GAACGCTACG
TTCTTCGACA CGCTGACGCT GGAGACCGGC TTCAACACCG ACGCGTTCCA CGCATCGGCC
ACGGCCCGTG GCATCAACCT GCGCCACGTG GACGCCACCC GCATCGGCAT TTCGTTCGAT
GAAACCGCAT CGCGCGACGA CGTGATCGCG CTGTGGGAAA TCTTCGCGCA CGGCAAGGCC
GTGCCCGACT TCGACACGAT CGAAGCCTCG GTGCAGGACG GCTTCCCGGC GACGCTGGCG
CGCCAGAGCG CGTACCTCAC GCACCCGGTG TTCAACACGC ACCACGCCGA ACACGAGATG
TTGCGCTACC TGCGTGCGCT GGCCGACAAG GACCTCGCGC TCGACCGCAC GATGATCCCG
CTGGGCTCCT GCACCATGAA GCTCAACGCC ACCAGCGAGA TGATCCCGGT GACGTGGCCC
GAGTTCAGCA ACATCCACCC GTTCGCGCCG CTCGACCAGA CCGTCGGCTA TCGCGAAATG
ATCGACCAGC TTGAGGCGAT GCTGTGCGCC GCCACCGGCT ACGCCGCGGT GAGCCTGCAG
CCGAACGCCG GTTCGCAGGG CGAGTACGCG GGCCTGCTGA TTATCCATGC CTATCACGCG
AGCCGTGGCG AAAGCCATCG CGATATCTGC CTGATCCCGT CGTCCGCGCA CGGCACCAAC
CCGGCGTCGG CGCAGATGGC CGGCATGAAG GTGGTGGTGG TGGCCTGCGA CGAGAACGGC
AACGTCGATC TGGCGGATCT GGCCAAGAAG GCCGAGCAGC ACAGCAAGAA CCTGGCCGCG
ATCATGATCA CCTACCCGTC CACGCACGGC GTGTTCGAGC AGGGCGTGCA GCAGATCTGC
GACATCGTGC ACAAGCACGG CGGGCAGGTC TACGTTGACG GCGCGAACAT GAACGCGATG
GTCGGCGTGG CCGCGCCGGG CCAGTTCGGT GGCGACGTGT CCCACCTGAA TCTGCACAAG
ACGTTCTGCA TTCCGCACGG CGGTGGCGGC CCGGGCGTCG GCCCGGTGGC GGTGGGCGCG
CATCTGGCGG ACTTCCTGCC GAACCAGGAC AGCGTCGGCT ATCGTCGCGA CGAGAACGGC
ATCGGCGGTG TCTCGGCCGC GCCGTTCGGC TCGGCCAGCA TCCTGCCGAT TTCGTGGATG
TATATCGCGA TGATGGGCTC GGCCGGCCTG ACCGCCGCCA CCGAGAACGC GATCCTGACG
GCCAACTACG TGGCCCGGCG TCTGTCGCCG CACTTCCCGG TGCTCTACAC GGGCCAGCAC
GGCCTGGTGG CGCACGAGTG CATTCTGGAT CTGCGCCCGC TGCAGAAGGC CACTGGCATC
AGCAACGAGG ACGTGGCCAA GCGCTTGATG GACTACGGCT TCCACGCGCC GACCATGAGC
TTCCCGGTGC CGGGCACGCT GATGATCGAG CCGACCGAGA GCGAGGCACT GCACGAGCTC
GACCGCTTCA TCGACGCGAT GATCGCCATC CGTGGCGAGA TCGCGCGTGT CGAGGACGGC
AGCTTCGATC GCGAAGACAA CCCGCTCAAG CACGCGCCGC ACACAGCAGC CGTGGTGGTC
AGCGACAAGT GGAACCACAA GTACACGCGC GAGGAAGCCG CCTACCCGGT GGCATCGCTG
CGCACGCAGA AGTACTGGCC GCCGGTTGGC CGCGCGGACA ACGTGTACGG CGACCGCAAT
CTGTTCTGCT CGTGCGTACC GCTAAGCGAG TACGCTGAAG ACTGA
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| Protein sequence | MNAPLPMNAA AQGARPTLAE LEARDAFAAR HIGPDSAEQQ HMLKVLGFES RAALIDAVVP
AAIRRRDGMS LGEFTAPLTE EAALGRLRAL AGKNRVLKSF IGQGYYNTLT PGVILRNIFE
NPAWYTAYTP YQPEISQGRL EAMLNFQQMI TDLTGLDIAN ASMLDEGTAA AEAMTLLQRV
NKHASNTFYV AEDVLPQTLE VVRTRALPLG IEVKVGPAAD AAQAHAFGVL LQYPGVNGDV
ADYRAIAEAV HASGGRVVAA ADLLALTLIA APGEWGADVT VGNSQRFGVP LGFGGPHAGY
MAVKDEFKRS MPGRLVGVTI DAQGNKAYRL ALQTREQHIR REKATSNICT AQVLLAVMAS
MYAVYHGPQG LKRIAQRVHR LTATLAAGLK TLGHTPLNAT FFDTLTLETG FNTDAFHASA
TARGINLRHV DATRIGISFD ETASRDDVIA LWEIFAHGKA VPDFDTIEAS VQDGFPATLA
RQSAYLTHPV FNTHHAEHEM LRYLRALADK DLALDRTMIP LGSCTMKLNA TSEMIPVTWP
EFSNIHPFAP LDQTVGYREM IDQLEAMLCA ATGYAAVSLQ PNAGSQGEYA GLLIIHAYHA
SRGESHRDIC LIPSSAHGTN PASAQMAGMK VVVVACDENG NVDLADLAKK AEQHSKNLAA
IMITYPSTHG VFEQGVQQIC DIVHKHGGQV YVDGANMNAM VGVAAPGQFG GDVSHLNLHK
TFCIPHGGGG PGVGPVAVGA HLADFLPNQD SVGYRRDENG IGGVSAAPFG SASILPISWM
YIAMMGSAGL TAATENAILT ANYVARRLSP HFPVLYTGQH GLVAHECILD LRPLQKATGI
SNEDVAKRLM DYGFHAPTMS FPVPGTLMIE PTESEALHEL DRFIDAMIAI RGEIARVEDG
SFDREDNPLK HAPHTAAVVV SDKWNHKYTR EEAAYPVASL RTQKYWPPVG RADNVYGDRN
LFCSCVPLSE YAED
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