| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3310 |
|---|
| Symbol | rplP |
|---|
| ID | 4040145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3576907 |
|---|
| End bp | 3577323 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637978716 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_585451 |
|---|
| Protein GI | 94312241 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000336027 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAC CGAAGCGTAG GAAGTATCGC AAGGAGCAGA AGGGCCGCAA CACGGGTAAG
GCTACCCGTG GTAACGCCGT GTCTTTCGGC GAATTCGGCC TGAAGGCAAT GGGCCGTGGT
CGCCTGACCG CTCGTCAGAT CGAGTCGGCA CGTCGTGCGA TGACCCGTCA CATCAAGCGT
GGCGGCCGCA TCTGGATCCG GATTTTCCCG GACAAGCCGA TCTCGAAGAA GCCTGCCGAA
GTTCGTATGG GTAACGGTAA GGGCAACCCG GAATACTACG TGGCTGAAAT TCAGCCGGGC
AAGATGCTGT ACGAAATGGA TGGCGTGAGC GAAGAGCTGG CGCGTGAGGC GTTCCGCCTC
GCGGCCGCCA AGCTGCCGAT CGCCACGAAT TTCGTGGTGC GTCAGGTCGG TACGTAA
|
|---|
| Protein sequence | MLQPKRRKYR KEQKGRNTGK ATRGNAVSFG EFGLKAMGRG RLTARQIESA RRAMTRHIKR
GGRIWIRIFP DKPISKKPAE VRMGNGKGNP EYYVAEIQPG KMLYEMDGVS EELAREAFRL
AAAKLPIATN FVVRQVGT
|
|---|
| |