Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3305 |
Symbol | rplE |
ID | 4040140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3574893 |
End bp | 3575435 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637978711 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_585446 |
Protein GI | 94312236 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000419375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAC GTCTGCAAGA GTTTTACAAA GAACAGGTTG TGCCGGCGCT GATGAAGCAG TTCGGCTACA AGTCGGTCAT GGAAGTGCCG CGTTTCACCA AGATCACCCT GAACATGGGC CTTGGCGAAG CCATCAATGA CAAGAAGGTC ATTGAGCTGG CCGTTGGCGA CCTGACCAAG ATCGCCGGTC AGAAGCCTGT GGTGACGAAG GCCAAGAAGG CCATCGCCGG CTTCAAGATC CGTCAGGGCT ACCCCATCGG TGCGATGGTG ACCCTGCGCG GTGAGCGTAT GTTCGAATTC CTGGATCGTT TCGTGACCGT GGCCCTGCCG CGCGTACGTG ACTTCCGTGG TGTGTCGGGC AAATCGTTCG ACGGTCGTGG TAACTACAAC ATCGGTGTGA AAGAGCAGAT CATTTTCCCC GAAATTGAGT ACGACAAGAT CGACGCACTG CGTGGTCTGA ACATCAGCAT CACGACGACG GCTAAGAACG ACGAGGAAGC CAAGGCTCTC CTGAATGCGT TCAAGTTCCC GTTCCGTAAT TAA
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Protein sequence | MTARLQEFYK EQVVPALMKQ FGYKSVMEVP RFTKITLNMG LGEAINDKKV IELAVGDLTK IAGQKPVVTK AKKAIAGFKI RQGYPIGAMV TLRGERMFEF LDRFVTVALP RVRDFRGVSG KSFDGRGNYN IGVKEQIIFP EIEYDKIDAL RGLNISITTT AKNDEEAKAL LNAFKFPFRN
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