| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3276 |
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| Symbol | |
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| ID | 4040111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3551267 |
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| End bp | 3552526 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978682 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_585417 |
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| Protein GI | 94312207 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT TCTTTTCGCG CCGCGATGGC ATTCTCGCCG TCGAGCAAGT CCCGCTGACC
CGCATTGCCG ACCAGTTCGG CTCGCCGACC TTTGTCTACT CGCGGGCCGC GCTGACGGCC
GCGTACAACG CCTACGCGGC CGCGTGCAAG GGCCGCAACG CCCACGTGCA ATATGCGGTG
AAGGCCAATT CGAACCTGGC CGTACTGCAG GTCTTCGCGC AACTCGGCGC GGGATTCGAC
ATCGTTTCCG GTGGTGAGCT GCTGCGCGTG ATCGCGGCTG GCGGCGACCC GCGCAAGGTG
GTGTTCTCTG GTGTCGCGAA GAACGTCGCC GACATGGAGT TGGCGCTGAG CCACGACGTG
CGCGGCTTCA ACGTCGAGTC GATTCCCGAA CTGGACCGCC TGAACGCTGT CGCCGGCCGT
CTTGGCAAGC GCGCGCGCGT ATCGCTGCGC ATCAACCCGG ATGTGGATGC CAAGACGCAT
CCGTACATCT CGACGGGCCT CAAGGCCAAC AAGTTCGGCG TCGCCTTCGA GGACGTGCTG
CCGACCTATC GTGCCGCCGC AGCGCTGCCG AATATTGAGG TCACCGGCAT CGACTGCCAT
ATTGGCTCGC AGATCACCGA GGTGGCGCCT TATCTGGAGG CGCTCGACAA GGTGCTCGAC
GTGGTCGAGG CGCTCGAGGC CGAAGGCATC AAGCTGGAAC ATATCGATGT GGGCGGTGGC
CTGGGCATCA CCTACAACGA TGAAACCCCG CCGGACATCA CGAAGTTCGC CACCACGCTG
ATCGACCGTG TGGCCGCGCG CGGCCACGGG CACCGCGAGG TCCTGTTCGA ACCGGGCCGT
TCGCTGGTCG GCAACGCCGG CGTGTTGTTG ACCCGTGTGG AATTCCTGAA GCCAGGCGCG
GCCAAGAACT TCTGCATCGT CGACGCGGCA ATGAACGATC TGGCGCGTCC CGCGATGTAT
GAGGCATTCC ACCGCATCGA ACCGGTCGCC CCTCGCAACG ACGCGGGGGT GATGTACGAC
GTAGTGGGTC CGGTCTGCGA GTCCGGCGAC TGGCTCGGCC GCGACCGCAC GCTGGCCGTT
CAGGCCGGCG ACCTGCTGGC GGTGATGTCG GCCGGCGCCT ATGGTTTCGT GATGAGCTCG
AACTACAACA CGCGCGGCCG CGCGGCCGAG GTGATGGTCG ACGGCGATAC CGTGCATCTG
GTGCGCGAGC GCGAGTTGCC GGCGGACCTG TTCCGCAACG AGCGACTGCT GAAGGTCTGA
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| Protein sequence | MTDFFSRRDG ILAVEQVPLT RIADQFGSPT FVYSRAALTA AYNAYAAACK GRNAHVQYAV
KANSNLAVLQ VFAQLGAGFD IVSGGELLRV IAAGGDPRKV VFSGVAKNVA DMELALSHDV
RGFNVESIPE LDRLNAVAGR LGKRARVSLR INPDVDAKTH PYISTGLKAN KFGVAFEDVL
PTYRAAAALP NIEVTGIDCH IGSQITEVAP YLEALDKVLD VVEALEAEGI KLEHIDVGGG
LGITYNDETP PDITKFATTL IDRVAARGHG HREVLFEPGR SLVGNAGVLL TRVEFLKPGA
AKNFCIVDAA MNDLARPAMY EAFHRIEPVA PRNDAGVMYD VVGPVCESGD WLGRDRTLAV
QAGDLLAVMS AGAYGFVMSS NYNTRGRAAE VMVDGDTVHL VRERELPADL FRNERLLKV
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