| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3274 |
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| Symbol | |
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| ID | 4040109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3548077 |
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| End bp | 3550455 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978680 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_585415 |
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| Protein GI | 94312205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAG CACAACAGAA GCCGTCCCTT CCCGTCCGCC GCCCATTGTG GGCACGGATC
ATGATCTGGG TGATCGGACT GCTTATCGCC GGCATGGCAG CGGTAGCGCT GCTGGTTGGC
TATGCGTTGG TTGTGGCGGC GCCGAACCTG CCGTCGCTGG ACACGATCAC CGACTACCGC
CCCAAGATCC CCCTTCGGAT CTATACGGCC GACAACGTGC TGATCGGCGA GTTCGGCGAG
GAACGTCGCA ACTTCGTGCC GATCACCGAA ATCCCCGATG TCATGAAGAA GGCCGTGCTC
GCGATCGAGG ACGACCGGTT CTACGAGCAC GGCGGCGTGG ACTTCGTCGG CGTGATGCGC
GCCGGCCTGG CCAACCTGCG CGGGGGTCTG TCGCAAGGTG CCTCGACGAT CACGATGCAG
GTGGCGCGCA ACTTCTTCCT TTCGAGCGAG AAGACCTACA CGCGCAAGAT TTATGAAATG
CTGCTCGCGT ACAAGATCGA GGCGAATCTG AGCAAGGATC AGATCCTCGA GCTCTACATG
AACCAGATCT ATCTGGGGCA GCGCGCCTAC GGCTTCGCCA GCGCGGCGCG CGTGTACTTC
GGCAAGTCGA TCAAGGACGT GACGCCGGCC GAGGCCGCCA TGCTGGCCGG CCTGCCCAAG
GCGCCGTCGG CCTACAACCC GGTGGTCAAC CCACGCCGCG CGAAGGTGCG CCAGGAGTAC
ATCCTGCAGC GCATGCGCGA CCTGCACTAC ATCACGCCGG AACAGTACGA CCAAGCCGTG
CGCGAACCAC TGAACGTGCG TAGTGAAGGC AACGAATTCT CGACCCACGC CGAGTACGTG
GCGGAAATCG TGCGCCAGCT GATGTACGCG CAGTACCGCG AGGAAACCTA TACCCGCGGC
CTGACGGTCT ACACCACGCT GACCAAGCCC GATCAGGATG CCGCCTACGA GTCCGTGCGC
AGCGGCATCA TGAACTACGA GCGCAAGCAC GGCTATCGCG GCCCCGAAGC GTTCATCGAC
CTGCCGTCCG ATCCGACCGA ACGTGAACAG GCCATCGACG ATGCGCTGGT CGAGCATCCG
GGCAGCGACG ACCTGCGCTC CGCCGTGGTC ACGAGCGTCA CGCCGAAACA GGTTCGCGCG
ACTCTGCTCT CGGGCGAGGT GGCAACGATC GAAGGCACGG CGCTGCGCTT CATCGCGCCG
TCGCTGGCGG CCAGCGCGCA GCCCAAAGTG AAGATCCGCC CGGGCGCGAT CATCCGCGTG
ACGCAGGACC CGAAGGACAA CTCGTGGACG GTGACACAAT TGCCGGAAGT CGCCGCCGCG
TTCATCTCGA TCAACCCCGA GGACGGTGCG ATCCGCTCGA TGGTGGGTGG CTTCGACTAC
AACCGGAACA AGTTCAACCA TGTGACGCAA GCCTGGCGTC AGCCCGGATC GAGTTTCAAG
CCGTTCATCT ACACGGCTGC GCTCGAAAAG GGCTTCTCGC CGGCCACGGT GATCAATGAC
GCACCGCTGA CGATCGGACC GGATACGGGT GGCCAGGTCT GGGAACCCAA GAACTACGAC
GGCAAGTTCG AAGGTCCGAT GACGATGCGC CGCGCACTGG CCAAGTCGAA GAACCTGGTG
TCGGTGCGTA TCCTGCGCGC GATCGGCACG CAGTACGCCC AGGACTACAT CACGCGCTTC
GGCTTCGAGG CCGACAAGCA TCCGGCCTAC CTGCCGATGG CGCTTGGCGC GGGTAGCGTG
ACACCGCTGC AGATGGCGGG CGCCTACTCG GTGTTCGCCA ATGGCGGCTA TCGCATTAAC
CCGTTCCTGA TCCAGCGGGT CGAGGATTCG CGCGGCAAGA TCGTCTCGGA GACTCATCCT
CAGAAGGCTG GCGGCGATGC CGTGCGGGTG CTCGACGCAC GCACCGCGTT CATCGCCGAC
AGCATGCTGC GCGAGGTCGT GCGTAGCGGC ACGGCGAACC CGGCCAAGCA GCGCCTGGGC
CGTAACGACA TGGCCGGCAA GACCGGTACC ACCAACGATG CGGTCGATGC GTGGTTCGCC
GGCTACACGC CGAAGCTGGT GGCGATTGCC TGGATGGGCT ACGACCAGCC CAAGAGCCTC
GGTGTGCGCG AAACCGGTGG CGGACTGGCA CTGCCGATCT GGGTCGGCTA CATGAGCAAG
GCGCTCAAGG GTGTGCCGGA AAGCCCGGAT CGCCAGCCGC CTGAAGGTGT GGTCATGGTA
GCGGGAGACT GGACGCTCGA GGAAAACGCC GGCGGCGCAG GCGTGGCATC TGTGGGCCTG
GGCGACCCAT GGCCTGGCAA GCCGGACGAA AGCTCGCGCC CGCCACAGGA CACCGAGGCG
GAAAAGAAGA AGATCCTGGA AATGTTCGGC GGAGCCTGA
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| Protein sequence | MATAQQKPSL PVRRPLWARI MIWVIGLLIA GMAAVALLVG YALVVAAPNL PSLDTITDYR
PKIPLRIYTA DNVLIGEFGE ERRNFVPITE IPDVMKKAVL AIEDDRFYEH GGVDFVGVMR
AGLANLRGGL SQGASTITMQ VARNFFLSSE KTYTRKIYEM LLAYKIEANL SKDQILELYM
NQIYLGQRAY GFASAARVYF GKSIKDVTPA EAAMLAGLPK APSAYNPVVN PRRAKVRQEY
ILQRMRDLHY ITPEQYDQAV REPLNVRSEG NEFSTHAEYV AEIVRQLMYA QYREETYTRG
LTVYTTLTKP DQDAAYESVR SGIMNYERKH GYRGPEAFID LPSDPTEREQ AIDDALVEHP
GSDDLRSAVV TSVTPKQVRA TLLSGEVATI EGTALRFIAP SLAASAQPKV KIRPGAIIRV
TQDPKDNSWT VTQLPEVAAA FISINPEDGA IRSMVGGFDY NRNKFNHVTQ AWRQPGSSFK
PFIYTAALEK GFSPATVIND APLTIGPDTG GQVWEPKNYD GKFEGPMTMR RALAKSKNLV
SVRILRAIGT QYAQDYITRF GFEADKHPAY LPMALGAGSV TPLQMAGAYS VFANGGYRIN
PFLIQRVEDS RGKIVSETHP QKAGGDAVRV LDARTAFIAD SMLREVVRSG TANPAKQRLG
RNDMAGKTGT TNDAVDAWFA GYTPKLVAIA WMGYDQPKSL GVRETGGGLA LPIWVGYMSK
ALKGVPESPD RQPPEGVVMV AGDWTLEENA GGAGVASVGL GDPWPGKPDE SSRPPQDTEA
EKKKILEMFG GA
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