Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3271 |
Symbol | |
ID | 4040106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3545875 |
End bp | 3546519 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637978677 |
Product | fimbrial assembly |
Protein accession | YP_585412 |
Protein GI | 94312202 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGA CGACGAATTC CATTCCGTCG GTCAACCTGC TGCCGTATCA CGAGGCGCGC AAGGCGGCCC GGCGGAAGAA GGTCTACACG ATGCTGGGCG GAGCAGCGGG CGCGGGGGCG CTCGTGGTTC TGATCGGCGG CTTCTATATC GACTCGCAGA TCGATGCCGT CGCGGCACGC AATCAGGTGC TGAAGACGGA AAACGCCAGC ATGGATGCGA CGATCAGCAG GGTCAACTCG CTGAAGAAGG ACATCGAGGC ACTGCTGGAT CGCCAACGCG CGATCGAGAG CCTGCAGGCG CAGCGAAACC TGCCCGTGCA ACTGCTCGAG GAACTTGTGC GTCAGGTGCC GGAAGGCGTC TACCTGTCCA GCCTCAAGCA GACCGGTGAC AAGTTCGTGA TGTCTGGCGT GGCGCAGTCC AACGAGCGGG TGTCCGAGCT GTTGCGCAAC ATCAGCCAGG TGACCTGGCT CGACCAGGCG GATCTGGTGG AGTCCAAGGC CATCAACATG ACCAACAACC TGCGCGAACA GCGCCGGTTG TTCGAATTCT CGATGCGCTT TTCCTATCGC GCGCCGGAAG TCCCGGGCGA CAAGAAAAAG GGCGCCTCCG ACGCCGCGGG CACGCCCGCT GGTCGAAAGG TCTGA
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Protein sequence | MSTTTNSIPS VNLLPYHEAR KAARRKKVYT MLGGAAGAGA LVVLIGGFYI DSQIDAVAAR NQVLKTENAS MDATISRVNS LKKDIEALLD RQRAIESLQA QRNLPVQLLE ELVRQVPEGV YLSSLKQTGD KFVMSGVAQS NERVSELLRN ISQVTWLDQA DLVESKAINM TNNLREQRRL FEFSMRFSYR APEVPGDKKK GASDAAGTPA GRKV
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