Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3269 |
Symbol | |
ID | 4040104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3544665 |
End bp | 3545204 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637978675 |
Product | pilus assembly protein PilQ |
Protein accession | YP_585410 |
Protein GI | 94312200 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3168] Tfp pilus assembly protein PilP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCGCC TGACCCGACG CCCTCCCATG GCACTGCGCG CAGTGGCGGT TGCGGCATTG GCCGTTGTCG CCCTGGCCGG CTGCGGTGCA GGCGAGGATG AACACCTCCA GCAATGGATG GCGCAGACGC GCGCGGCAAA GGTGCCGCCG CCCGAACCCT TGCCCGAGGT CAAGCCCTAC GAGCCGCGCC AGTATGCAGG CACCAAATCT CCCGAGCCCT TCGCGCAGAC GAAGATCGGT GAGTTGAACA AGGCGATGTC GGAGTCGCCG GAGGCCGGAC GGCGGCACGA GCCCCTTGAA GACTATCCGT TGGAGAACTT CAAGATGCTC GGGATGCTGA AGAAGAACGG CGAGACCTAC GGTGTCGTAC GCGTAGATAA CAAGATCCAT CACGTAAAGG TGGGTCAGTA TCTCGGCCAG AACTATGGCC GGGTGGTCCG CATCACCGAT CAGGAGATCG TGCTGCGCGA ATTGGTCCGG GAAGGGGTCT CAGAGTGGAA AGAGAAAATG ACCAGCCTGA AGCTGGAGGC ATCGGCATGA
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Protein sequence | MSRLTRRPPM ALRAVAVAAL AVVALAGCGA GEDEHLQQWM AQTRAAKVPP PEPLPEVKPY EPRQYAGTKS PEPFAQTKIG ELNKAMSESP EAGRRHEPLE DYPLENFKML GMLKKNGETY GVVRVDNKIH HVKVGQYLGQ NYGRVVRITD QEIVLRELVR EGVSEWKEKM TSLKLEASA
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