Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3263 |
Symbol | |
ID | 4040098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3533548 |
End bp | 3538443 |
Gene Length | 4896 bp |
Protein Length | 1631 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978669 |
Product | glutamate synthase (NADH) large subunit |
Protein accession | YP_585404 |
Protein GI | 94312194 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGCGGCG CGTCACGCTC GTGTACGCCG CTGCGGTCCC GCTGTCTGAC ATCGTCGCTC GAAGAAGCAC GTACACAGCC ATCCCGTTCG GTCTGCCTTG CTGGCTGCGC AGCCTTCACC GGAATTCAGC CCGTGGACCA CTCGCAACAA TCCTCCGAAC TCGCCGCCCG CCCGCAGGCT CAGGGCCTGT ATGACCCGTC CAACGAGCAC GATGCCTGCG GCGTCGGCAT GGTGGCTCAC ATCAAGGGCA AGAAATCCCA CGAAATCATC TCGCAGGGTC TGAAGATCCT CGAGAACCTG GACCACCGGG GTGCCGTGGG CGCCGACGCG CTGATGGGCG ATGGCGCCGG TATCCTGATC CAGATCCCGG ATCAGTTCTA CCGCGAGGAA ATGGCCAAGC AGGGCGTGAC CCTGCCGCCC GCCGGCGAAT ATGGCGTGGG CATGATCTTT CTGCCTAAGG AACACGCATC GCGTCTGGCC TGCGAACAGG AACTCGAACG CACCGTGCGC CTGGAAGGCC AGGTCGTGCT GGGTTGGCGT GATGTGCCGG TGGACGCGAA CATGCCGATG TCCCCGACCG TGCGCAAGAC CGAGCCGGTG ATCCGCCAGA TCTTCATCGG TCGTGGCCGC GACATCATGA CCACGGACGC GCTGGAACGT AAGCTCTACG TCATCCGCAA GACCGCCAGC CACGCCATCC AGGCGCTCAA GCTCAAGCAC GGCAAGGAAT ACTTCGTGCC GTCGATGTCG GCCCGTACCG TCGTGTACAA GGGCCTGCTG CTGGCCAACC AGGTGGGCGA GTACTACCTG GACCTGCTGG ACGCCCGCGC CGTGTCGGCC CTGGCTCTGG TCCACCAGCG CTTCTCGACC AATACGTTCC CGGCCTGGGA GCTGGCCCAC CCGTACCGCA TGGTTGCCCA CAACGGCGAA ATCAACACGG TGAAGGGCAA CGTGAACTGG GTGAACGCGC GTACCGGCGC GATCTCGTCG CCGGTGCTCG GCGATGACCT GCCCAAGCTC TGGCCGCTGA TCTACCCGGG CCAATCGGAT ACGGCATCGT TCGACAACTG CCTCGAACTG CTGACAATGG CCGGTTACCC GCTCGTCCAC GCGATGATGA TGATGATCCC GGAAGCTTGG GAACAACACA CGCTGATGGA CGACAACCGT CGTGCCTTCT ACGAGTACCA CGCCGCGATG ATGGAGCCGT GGGACGGCCC GGCCGCGATC TGCTTCACCG ACGGCCGCCA GATCGGCGCG ACGCTGGACC GTAACGGTCT GCGTCCGGCC CGCTTCTACG TGACCGAAGA CGATTTCGTC GTGCTGGCGT CGGAAGCCGG CGTGCTGCCG TTCCCCGAGT CGCGCATCGT CCAGAAGTGG CGTCTGCAGC CGGGCAAGAT GTTCCTGATC GACATGGAGC AGGGTCGCAT CATCGACGAC AAGGAACTCA AGGACAACCT GGCCAACGCC AAGCCGTACA AGAGCTGGAT CGACGCCGTG CGCATCAAGC TCGACGAGCT CGAGGCCAAG GCCGAGGACG TAGCCGCCGA GAAGAAGCCG GTGGCGCGTC TGCTCGACCG CCAGCAGGCA TTCGGCTACA CGCAGGAAGA CGTCAAGTTC CTGATGGCCC CGATGGCCCT GGCCGGTGAG GAAGCCACGG GCTCGATGGG CAATGACTCG CCGCTGGCTG TGCTGTCGTC GAAGAACAAG ACGCTCTACA ACTACTTCAA GCAGCTTTTC GCGCAGGTGA CCAACCCGCC GATCGACCCG ATCCGCGAGA ACATGGTGAT GTCGCTGGTG TCGTTCATCG GTCCGAAGCC GAATCTGCTG GAGCTGAACA ACATCAACCC GCCGATGCGC CTCGAAGTGT CCCAGCCCGT GCTGGACTTC AAGGACATCG CCAAGATCCG CAACATCGAG CACTACACCG GCGGCAAGTT CCGTTCGTAC GAACTGAACA TCTGCTACCC GGTGGCGTGG GGCAAGGAAG GCATCGAGGC CCGCCTGGCG TCGCTGTGCG CGGAAGCCGT GGATGCGGTG CGTTCGGGCT ACAACATCCT GATCGTGACG GACCGTCGCG TGGACGATGG CCAGGTGGCC ATTCCCGCGC TGCTGGCCAC GTCGGCCATT CACCACCACC TGGTCGAGAA GGGCCTGCGC ACGTCGGCCG GCCTGGTCGT GGAAACCGGT TCGGCCCGCG AAGTGCACCA TTTCGCGCTG CTGGCCGGCT ATGGCGCTGA AGCCGTGCAC CCGTACCTGG CGATGGAAAC GCTGGCCGAC ATGGCCTCGG GCCTGTCGGG TGACCTGTCG CCGGAAAAGG CTGTCAAGAA CTTCGTCAAG GCGATCGGCA AGGGCCTGCA CAAGGTGATG TCGAAGATGG GCATCTCCAC GTACATGTCG TACACGGGCG CCCAGATCTT CGAAGCCATC GGCCTGTCGC GCGAACTGGT GCAGAAGTAC TTCCACGGTA CGCCGTCGAA CGTCGAAGGC ATCGGCATCT TCGAGGTGGC CGAGGAAGCG CTGCGCCTGC ATCGCGACGC GTTTGGCAGC AACCCCGTGC TGGAAAACAT GCTCGAAGCC GGCGGCGAAT ACGCATTCCG TATCCGCGGT GAAGAACACA TGTGGACCCC GGACTCGATC GCCAAGCTGC AGCACTCGGT GCGCGCCGAC GATGGCAAGG GCCAGTACCA GACGTACAAG GAATACGCGA ACATCATCAA CGACCAGAGC CGCCGTCACA TGACGCTGCG TGGCCTGTTC GAGTTCAAGG TCGATCCGGC CCGCGCCATT CCGCTGGAAG AAGTGGAGTC GGCCAAGGAC ATCGTCAAGC GTTTCGCCAG CGGTGCCATG TCGCTGGGTT CGATCTCGAC TGAAGCCCAC ACGACGCTGG CCGTGGCGAT GAACCGCATC GGCGGCAAGT CGAACACCGG CGAAGGCGGC GAGGACGAGA AGCGCTATCG CAACGAACTG CGCGGCATCC CCATCAAGCA GGGCGACACG CTCAAGGGCC TGCTGGGCGA TGGCGTGATC GAGCGCGACC TGGAATTGAA GGCGGGCGAT TCGCTGCGCT CGAAGATCAA GCAGGTGGCC TCGGGCCGTT TCGGCGTGAC TGCCGAATAC CTGGCATCGG CCGATCAGAT CCAGATCAAG ATGGCCCAGG GCGCCAAGCC GGGCGAAGGC GGCCAGCTGC CCGGCCACAA AGTCTCGGAC TACATCGGCA AGCTGCGTTA CTCGGTGCCG GGTGTGGGTC TGATCTCGCC GCCGCCGCAC CACGACATCT ACTCGATCGA GGATCTGGCA CAGCTGATCC ACGACCTGAA GAATGTGAAC CCGGTGTCGG ACATCTCGGT CAAGCTCGTG TCCGAAGTGG GCGTGGGTAC CGTGGCGGCT GGCGTGGCCA AGGCCAAGGC CGATCACGTG GTGATCGCCG GCCATGACGG CGGCACCGGC GCATCGCCGC TGTCGTCGAT CAAGCACGCC GGCACGCCGT GGGAACTGGG TCTGGCCGAG ACGCAGCAGA CGCTGATGCT GAACGGCCTG CGCAACCGTA TCCGCGTGCA AGCCGACGGT CAGATGAAGA CCGGCCGCGA CGTCGTGATC GGCGCGCTGC TGGGCGCTGA CGAGTTCGGT TTTGCTACCG CGCCGCTGGT TGCCGAAGGC TGCATCATGA TGCGCAAGTG CCATCTGAAC ACCTGCCCGG TGGGCGTGGC CACGCAAGAT CCGGCGCTGC GCAAGAAATT CCAGGGCAAG CCCGAGCACG TTGTGAACTT CTTCTTCTTC GTTGCGGAAG AAGCGCGCGA GATCATGGCG CAACTGGGTA TCCGCACGTT CGACGAACTG ATCGGCCGCG CCGACCTGCT CGACATGCGC GCCGGTATCG AACACTGGAA GGCGCGTGGC CTGGACTTCG GCCGCATCTT CTACCAGCCG CCGTTCCCGG CCGACGTGCC GCGCTACCAC ACCGACGTGC AGGATCACGG CCTGTCGGCG GAAGCCGGCA AGGCGCTCGA CCACGTGCTG ATCGCCAAGG CGCGTCCGGC CATCGACAAG GGCGAACGCG TGTCGTTCAT CCAGCCGGTG AAGAACGTGA ACCGTACCGT TGGCGCGATG CTGTCCGGCG TGATCGCCAA GCAGCACGGC CACGAAGGCC TGGCCGACGA CACGATCCAC ATCCAGTTCC AGGGCACCGC CGGCCAGTCG TTTGCCGCGT TCCTGGCACA TGGCATCACG ATGGATCTGG TGGGTGACGC TAATGACTAC GTGGGCAAGG GCCTGTCGGG CGGCCGCGTG ATCGTGCGCG CTCCGCACGA GTTCCGTGGC GATCCGACCC GCAACATCAT CGTCGGCAAC ACGGTGCTGT ACGGCGCCAT CGCTGGTGAA GCCTTCTTCA ACGGCGTGGG CGGCGAGCGC TTCGCGGTGC GTAACTCGGG TGCCACGGCT GTCGTGGAAG GCACGGGCGA CCACGGTTGC GAATACATGA CCGGCGGTAC CGTCGTGGTG CTGGGTGGTA CGGGACGTAA CTTCGCAGCC GGCATGTCCG GTGGCGTGGC CTACGTCTAC GACGAGGATG GCCTGTTCGA CAAGCGCTGC AACACGTCGA TGGTGGCGCT CGAGGCAGTG CTGGCTTCGG CCGACCAGGA GAAGGGCCAG CCCAAGGCGC AGTGGCACAA GTTCGGTGGC GAGCGGACGG CCGACGAAGT CATCCTGCGT AACCTGATCG AGCAGCACTT CCGCTACACC GGTTCGGAGC GCGCCAAGGC GCTGCTGGCG GACTGGACCA CGGCACGCCG CAAGTTCGTC AAGGTCTTCC CGACCGAGTA CAAGCGCGCG CTGGGCGAGA TGTACGCGAA GGAACAGGCC GCGCGCGACA ACGATCGCGA GGCAGTGGCC GCCTGA
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Protein sequence | MCGASRSCTP LRSRCLTSSL EEARTQPSRS VCLAGCAAFT GIQPVDHSQQ SSELAARPQA QGLYDPSNEH DACGVGMVAH IKGKKSHEII SQGLKILENL DHRGAVGADA LMGDGAGILI QIPDQFYREE MAKQGVTLPP AGEYGVGMIF LPKEHASRLA CEQELERTVR LEGQVVLGWR DVPVDANMPM SPTVRKTEPV IRQIFIGRGR DIMTTDALER KLYVIRKTAS HAIQALKLKH GKEYFVPSMS ARTVVYKGLL LANQVGEYYL DLLDARAVSA LALVHQRFST NTFPAWELAH PYRMVAHNGE INTVKGNVNW VNARTGAISS PVLGDDLPKL WPLIYPGQSD TASFDNCLEL LTMAGYPLVH AMMMMIPEAW EQHTLMDDNR RAFYEYHAAM MEPWDGPAAI CFTDGRQIGA TLDRNGLRPA RFYVTEDDFV VLASEAGVLP FPESRIVQKW RLQPGKMFLI DMEQGRIIDD KELKDNLANA KPYKSWIDAV RIKLDELEAK AEDVAAEKKP VARLLDRQQA FGYTQEDVKF LMAPMALAGE EATGSMGNDS PLAVLSSKNK TLYNYFKQLF AQVTNPPIDP IRENMVMSLV SFIGPKPNLL ELNNINPPMR LEVSQPVLDF KDIAKIRNIE HYTGGKFRSY ELNICYPVAW GKEGIEARLA SLCAEAVDAV RSGYNILIVT DRRVDDGQVA IPALLATSAI HHHLVEKGLR TSAGLVVETG SAREVHHFAL LAGYGAEAVH PYLAMETLAD MASGLSGDLS PEKAVKNFVK AIGKGLHKVM SKMGISTYMS YTGAQIFEAI GLSRELVQKY FHGTPSNVEG IGIFEVAEEA LRLHRDAFGS NPVLENMLEA GGEYAFRIRG EEHMWTPDSI AKLQHSVRAD DGKGQYQTYK EYANIINDQS RRHMTLRGLF EFKVDPARAI PLEEVESAKD IVKRFASGAM SLGSISTEAH TTLAVAMNRI GGKSNTGEGG EDEKRYRNEL RGIPIKQGDT LKGLLGDGVI ERDLELKAGD SLRSKIKQVA SGRFGVTAEY LASADQIQIK MAQGAKPGEG GQLPGHKVSD YIGKLRYSVP GVGLISPPPH HDIYSIEDLA QLIHDLKNVN PVSDISVKLV SEVGVGTVAA GVAKAKADHV VIAGHDGGTG ASPLSSIKHA GTPWELGLAE TQQTLMLNGL RNRIRVQADG QMKTGRDVVI GALLGADEFG FATAPLVAEG CIMMRKCHLN TCPVGVATQD PALRKKFQGK PEHVVNFFFF VAEEAREIMA QLGIRTFDEL IGRADLLDMR AGIEHWKARG LDFGRIFYQP PFPADVPRYH TDVQDHGLSA EAGKALDHVL IAKARPAIDK GERVSFIQPV KNVNRTVGAM LSGVIAKQHG HEGLADDTIH IQFQGTAGQS FAAFLAHGIT MDLVGDANDY VGKGLSGGRV IVRAPHEFRG DPTRNIIVGN TVLYGAIAGE AFFNGVGGER FAVRNSGATA VVEGTGDHGC EYMTGGTVVV LGGTGRNFAA GMSGGVAYVY DEDGLFDKRC NTSMVALEAV LASADQEKGQ PKAQWHKFGG ERTADEVILR NLIEQHFRYT GSERAKALLA DWTTARRKFV KVFPTEYKRA LGEMYAKEQA ARDNDREAVA A
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