| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3164 |
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| Symbol | |
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| ID | 4039998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3435204 |
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| End bp | 3435644 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978569 |
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| Product | phenylacetic acid degradation protein PaaD |
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| Protein accession | YP_585305 |
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| Protein GI | 94312095 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000726933 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACGCAAG ATCCCCAAGC GCTTGCCGAA GCGGCCGCCC ATGCCATGTA CGAGTCCGAT
GCCTGCAGCC GCTGGCTCGG CATGGTCCTG GAAGCGGTCC GCCCCGGCTA TGCCCGCATA
TCTATGCCGA TCCGCCCCGA GTTCCTGAAC GGCCATGGCA TCTGCCATGG TGGACTGATG
TTCACCCTGG CAGATTCGAC GTTCGCATTC GCCTGCAACA GCCACAACAT CAATACGGTG
GCGTCGGGCT GCTCGATCGA ATTCCTGCGC CCGGTGCATG GCGGCGATGT ACTGACAGCC
GAAGCAGTCG AGCAGGTCTT GTCCGGCCGC CATGGCATCT ACGACATCCG CGTAACCAAC
CGCGCCGGCG AACCCGTGGC GATGTTCCGC GGCAAGTCGG CCCAGATCAA GGGGCACGTG
GTGCCACCCG CGGAGTCCTG A
|
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| Protein sequence | MTQDPQALAE AAAHAMYESD ACSRWLGMVL EAVRPGYARI SMPIRPEFLN GHGICHGGLM
FTLADSTFAF ACNSHNINTV ASGCSIEFLR PVHGGDVLTA EAVEQVLSGR HGIYDIRVTN
RAGEPVAMFR GKSAQIKGHV VPPAES
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