| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3153 |
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| Symbol | |
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| ID | 4039982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3416711 |
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| End bp | 3417907 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978553 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_585294 |
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| Protein GI | 94312084 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.154593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTGC AATCTAGGGT CAATCGCCGG ACATTTGCCG GCCTGCTGAT GGCATGCGCC
ATCGGTAGCT GCGGCGTGAC TGGCGCCGCC TTTGCCGCCA ACACCACGGC TGGCGAAACG
GGGGTCACAG CCGACAGCAT CCTGCTGGGC CAGTCGGCCG CGCTATCCGG CCCCACGGCC
GTGCTCGGCA AGCAGATGAA CGCCGGCGCC CGCCTCTACT TCGACTACAT CAACAAGCAG
GGCGGCGTGT TCGGCCGCAA GATCGAGCTC AAGGCGCTCG ACGACATGTA CGAGCCGGAA
GAGGCCGTCA AGAATACGAA GAAGCTGATC GAGGAAGACC GGGTCTTCGC CCTGTTCGGC
TACGTGGGCA CGCCGACCAG CCAGGCCGTG ATGCCGCTGG TCAACCAGGC ACGCATCCCG
TTCTTCGCGC CGTTCACGGG GGCGCAGTCG CTGCGCGACC CGCAGAGCCG CTACGTATTC
CATGTGCGCG CAGGCTATGA GGAAGAAACC GCCGCGATCG TGCGCCAGAT CCGTACCACC
GGCCTCAAGC GCATCGTCGT GGTGTTTAAT GACGACGCTT ACGGCCGTGC CGGCCTCTCC
GGCGTCGAGC ACGCCATCAA GGCCCTGCCG GCCGACAGCG GCGTGCAACT GGTGGCCCAG
GAAAGCGTGA TCCGGAACAC GGTGGAAATC GGCGATGCCA TGCAGACGGC GATGAAGGCC
AAGCCGGACG CGGTGGTGCT GATCAGCGCC TACCGCACGG TCGGCGCCTT CGTGAAGGAA
GCGCTGCGAC GCGGCTACAG TGGGCAGTTC TACAACGTGT CGTTCGTCGG CACCCAGGCG
CTGGCCAAGG AAGTGGGGCC GCAGGGCAGC GGCGTGATCA TCTCGCAGGT AATGCCGCAC
CCCGGCAATG CCACGCTGCC GGTGGTGCGC GAGTACCTGC GGCTGCTGCA GGCGGCTGGC
AAGCAGAACG ATTTCGACTA CGCCAGCATC GAGGGCTTCA TCGCCGCCAA GTCGTTCGTC
GAGGGCCTGC GGCGCGCGGG CAAGGACCTG ACGCGCGAGC GCCTGGTGAC GGCGCTGGAA
ACCATGCGTA ACGTCGACCT CGGCGGCTAT ATCGTCCAGT TCTCACCCGA GAGCCATGTG
GGCTCGAAGT TCGTCGAGAT GACGATCATC AACTCGCGGG GCGTGGTGAT TCGCTGA
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| Protein sequence | MVLQSRVNRR TFAGLLMACA IGSCGVTGAA FAANTTAGET GVTADSILLG QSAALSGPTA
VLGKQMNAGA RLYFDYINKQ GGVFGRKIEL KALDDMYEPE EAVKNTKKLI EEDRVFALFG
YVGTPTSQAV MPLVNQARIP FFAPFTGAQS LRDPQSRYVF HVRAGYEEET AAIVRQIRTT
GLKRIVVVFN DDAYGRAGLS GVEHAIKALP ADSGVQLVAQ ESVIRNTVEI GDAMQTAMKA
KPDAVVLISA YRTVGAFVKE ALRRGYSGQF YNVSFVGTQA LAKEVGPQGS GVIISQVMPH
PGNATLPVVR EYLRLLQAAG KQNDFDYASI EGFIAAKSFV EGLRRAGKDL TRERLVTALE
TMRNVDLGGY IVQFSPESHV GSKFVEMTII NSRGVVIR
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