Gene Rmet_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3150 
Symbol 
ID4039979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3413131 
End bp3414288 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content66% 
IMG OID637978550 
Productputative zinc protease protein 
Protein accessionYP_585291 
Protein GI94312081 
COG category[R] General function prediction only 
COG ID[COG4324] Predicted aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT GGCCGGCCCG CCGGCGCCTG GCGAGTGCCC TGGCGGTGCT CGGCGCGGCG 
TTGCTGGTGG CCGGCTGCGA CACACTCGGC TATTACTATC AGTCGATCGG CGGCCATCTT
GGCGTGATGG CGCAGGCACA GCCGATCGAC GATGCCATTG CCACGGCCAA TGGCGCCCAC
GATGCGCGCC TGGCCCAGCG TCTGACGCTG GCCCGCGAGA TCCGTGACTA CGCCTCGCGC
GAGTTGAAGC TGCCTGACAA CGGCAGCTAT CGCCGCTACG CCAACCTGCA TCGTCCCTAT
GTGGTGTGGA GCGTGTTCGC CACGCCCGAG CTGTCGATGG ATCTGCGCAA GTGGTGCTTT
CCGATCGTCG GTTGCATCAC CTATCGGGGC TACTACGACC AGAAAGCTGC CGACCACTAC
GCGCTGGGGC TGCGCCGTGA CGGGCTGGAG GCCTATGTGG CCGGCATCCC CGCGTATTCC
ACGCTTGGCT ACTTCGACGA CCCGCTGCTC AACACCTTCG TCTACCTGCC CGAAGGCGAA
CTGGCGCGGC TGATCTTCCA CGAACTGGCG CATCAGGTGG TTTACGTGCG CAACGACACG
GCGTTCAACG AGTCGTTTGC CACGGCGGTG GAGACGGCCG GCGTCGAGCG CTGGCTCGCG
CAGGAAGGAT CGCCCGAGGT GCGCGCCAGC TATCAGATCT ACGACAAGCG GCGGCGCCAG
TTCCGCACCA TGCTGCTGGG CGCGCGCGAC CAACTGGTCG AGCTTTACCA TTCGCCGCTC
GACGACGACG CCAAGCGGCA AGGCAAAGCG CGTATCTTCG ACGAACTGCG CCAGACGTAT
GCGAACCTCA AGAAGGACGA GTGGGGCGGC TACAGCGGCT ACGACCGATG GTTCGAGCAG
CCGCTGACCA ATGCCCATCT GGCCGCTGTC GCCACGTATC AGCAATGGGT GCCGGCTTTT
ACCGCGTTGC TGGCGCAATG CGACGGTGAC TGGGACCGCT TCTACGCGGC CGCGCGCAAG
ATCGGCGATC TCCCGCCGGC AGAGCGCGAC GCGGCCTTGC GCAAGCTGGC GCCGCCCGCC
ACCGAGGTGA AGCCACTGAC CGCCTTGCGT GCGACGGACG CCGGCAGTCA GACATCCGCT
ACCAGTCAGG GGCAGTAG
 
Protein sequence
MIRWPARRRL ASALAVLGAA LLVAGCDTLG YYYQSIGGHL GVMAQAQPID DAIATANGAH 
DARLAQRLTL AREIRDYASR ELKLPDNGSY RRYANLHRPY VVWSVFATPE LSMDLRKWCF
PIVGCITYRG YYDQKAADHY ALGLRRDGLE AYVAGIPAYS TLGYFDDPLL NTFVYLPEGE
LARLIFHELA HQVVYVRNDT AFNESFATAV ETAGVERWLA QEGSPEVRAS YQIYDKRRRQ
FRTMLLGARD QLVELYHSPL DDDAKRQGKA RIFDELRQTY ANLKKDEWGG YSGYDRWFEQ
PLTNAHLAAV ATYQQWVPAF TALLAQCDGD WDRFYAAARK IGDLPPAERD AALRKLAPPA
TEVKPLTALR ATDAGSQTSA TSQGQ