Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3126 |
Symbol | ddl |
ID | 4039955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3388200 |
End bp | 3389183 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978526 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_585267 |
Protein GI | 94312057 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCG TCGCCCATCC CAATATCGAT CCGAAGTCGC TGGGCAAGGT TGGCGTGCTG CTGGGTGGCA AGTCCGCCGA GCGCGAGATC TCGCTGCTGT CCGGTAACGG TGTGCTGGCC GCGCTGAAGT CGCGCGGCGT CGATGCGCAT CCGTTCGATC CGGGCCTGCA GCCGATCAGC GAACTGGCTG CCGCAGGTTT CGACCGCGTT TTTATCGCGC TGCACGGTCG CTACGGCGAA GACGGCACGA TGCAGGGCCT GCTCGAGCAG CTTGGCATCC CCTATACCGG CAGCGGCGTG CTGGCGTCGG CGCTGGCCAT GGACAAGCAG GCTACCAAAC GCCTGTGGAT GACGCACGGC CTGGCTACGC CGCGCTTCGC GATGCTCTAC GCGAATACCG ATTTCGATGC CGTGGTTGCC GATCTTGGCC TGCCGCTGAT CGTCAAGCCG GCCCGTGAAG GGTCGTCGAT CGGCCTGACC AAGGTGATCG CCGCGGACCA GATGCGCGCT GCATTCGAGA AGGCCGCAGG GCTCGATGCC GACGTGATCG CCGAGACTTT CATCGATGGC GCGGAGCTGA CTTGCCCGAT CGTGGGCGAG GGTCCGACGG CCGAAGCGCT CCCAGTTATC AAGATTGTCG CGCCGGAGTC GAACTACGAC TATCAAAATA AGTATTTTAC TGACGATACC CAATACCTGT GCCCCTCGAC ATTGCCCGAC GCGCTGGAGC GCGAAGTGCG CGCGCTGGCC GTGGAGGCCT TCCGGGTGCT GGGGTGTCGC GGCTGGGCCC GCGCGGACGT GATGCTGACG CGCGACGGCA AGCCTTATCT GCTTGAAATG AATACGTCCC CCGGCATGAC CGGCCATTCG CTCGTGCCGA TGGCGGCGCG TGCGAATGGC ATCAGCTATG AGGACTTCGT CATGCAGGTA CTGGCGGCAG CCACGCTGGA CCTGCATCCG AATGAACACT GGAAACCCGA ATAA
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Protein sequence | MSFVAHPNID PKSLGKVGVL LGGKSAEREI SLLSGNGVLA ALKSRGVDAH PFDPGLQPIS ELAAAGFDRV FIALHGRYGE DGTMQGLLEQ LGIPYTGSGV LASALAMDKQ ATKRLWMTHG LATPRFAMLY ANTDFDAVVA DLGLPLIVKP AREGSSIGLT KVIAADQMRA AFEKAAGLDA DVIAETFIDG AELTCPIVGE GPTAEALPVI KIVAPESNYD YQNKYFTDDT QYLCPSTLPD ALEREVRALA VEAFRVLGCR GWARADVMLT RDGKPYLLEM NTSPGMTGHS LVPMAARANG ISYEDFVMQV LAAATLDLHP NEHWKPE
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