| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3107 |
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| Symbol | |
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| ID | 4039935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3365783 |
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| End bp | 3366760 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978506 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_585248 |
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| Protein GI | 94312038 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.339313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCCAGT CTTCCGCTAC TGCCCTGCTT GCCCCGGTCG CTGCCGACAT GCGCGCCGTT
GACGCAGTCA TCCGCCGGCG CCTGTCGTCG GAGGTGCCGC TGATCGAACA GATCGGCGAG
TACATCATCG GGGCGGGCGG CAAACGTCTG CGCCCCGTCA TCCTGCTGCT TTCCGCACGC
GCGTTCGACT ACGAAGGCCA TCGCCACCAC GAACTGGCCG CGGTGGTCGA GTTCATCCAC
ACCGCCACGC TCCTGCATGA CGACGTGGTC GACGAGTCGG AACTGCGCCG GGGCCGCGAT
ACCGCCAATG CGGTGTTCGG CAACGCCGCC AGCGTCCTGG TGGGCGACTT CCTCTATTCG
CGCGCCTTCC AGATGATGGT GGAAGCCGGC AGCATGCGCA TCATGGAGAT CCTCTCCAAC
GCCACCAACG TGATCGCCGA AGGCGAAGTG CTGCAACTGC TGAACATGCA CGACCCCGAA
GTCACGGTGG AGCGCTACCT GCAGGTCATC CGCTACAAGA CCGCCAAGCT GTTCGAGGCA
TCGGCCCAAC TGGGCGCGGT GCTCGCCGGC GCTGACGCGG AGATGGAAGA AGCGGCAGCG
GAGTACGGCC GCCGGATTGG CACCGCGTTC CAGCTGATCG ACGACATGCT CGACTACACG
GCCAGCGCCG AGCAGATGGG CAAGAACGCG GGCGACGACC TGCGCGAAGG CAAGCCGACG
CTGCCGCTGC TGCACCTGCT CGAACATGGC ACAGCCCAGC AGCGCGAACT GGCGCGCGAC
GCCATCGTGC AAGGCGGCAC CGAGCATTTC GATGCCGTGT TCTCGGCAAT CCACGCCAGC
GGCGCGCTCG ATGTGACGTT CGCAGCCGCC CAGCGTGAAG CAGAGGCCGC GGAAAAGGCC
GCCATGCAGT TCCCGGACTC GCCGCTCAAG CAGACGCTGA TCGACCTGTG CGCGTTCTCG
CTGCAACGGC AAAGCTGA
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| Protein sequence | MSQSSATALL APVAADMRAV DAVIRRRLSS EVPLIEQIGE YIIGAGGKRL RPVILLLSAR
AFDYEGHRHH ELAAVVEFIH TATLLHDDVV DESELRRGRD TANAVFGNAA SVLVGDFLYS
RAFQMMVEAG SMRIMEILSN ATNVIAEGEV LQLLNMHDPE VTVERYLQVI RYKTAKLFEA
SAQLGAVLAG ADAEMEEAAA EYGRRIGTAF QLIDDMLDYT ASAEQMGKNA GDDLREGKPT
LPLLHLLEHG TAQQRELARD AIVQGGTEHF DAVFSAIHAS GALDVTFAAA QREAEAAEKA
AMQFPDSPLK QTLIDLCAFS LQRQS
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