| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3100 |
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| Symbol | |
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| ID | 4039928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3359007 |
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| End bp | 3360728 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978499 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_585241 |
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| Protein GI | 161621298 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT CGCAATTCTT CATTTCCACC CTCAAGGAAG CCCCCGCCGA CGCGGAAATC
GTGTCGCATA AACTGATGAT GCGGGCCGGC ATGATCAAGA AGCTCGGCGC CGGCATCTAT
AACTACATGC CGGTGGGCCT GCGTGTGATC CGCAAGGTCG AGAACATTGT TCGCGAGGAA
ATGAACCGTG CTGGCGCCGT GGAGCTGTCG ATGCCGGTGA TCCAGCCTGC CGAACTCTGG
CAGGAGACTG GCCGCTGGGA CAAGATGGGG CCCGAGCTGT TGCGTCTGAA GGATCGGCAC
GAGCGCGATT TCGCGGTGCA GCCCACTTCC GAGGAAGTGG TCACGGACAT CGCCCGGACC
GAAATCCGCA GCTACAAGCA ACTACCGGTC AACTTCTACC AGATCCAGAC CAAGTTCCGC
GACGAGCGCC GTCCGCGCTT CGGCATCATG CGTGGCCGCG AGTTCACGAT GAAGGACGCC
TATTCGTTCG ACCGTGACAT CGACGGCCTG AAGGCGTCGT ACCAGAACAT GTACGACGCG
TATGTGCGCA TCTTCCAGCG CTTTGGCCTG GAATTCCGCG CCGTGGCGGC CGACAACGGC
GCCATCGGCG GTTCGGGCTC GCACGAGTTC CACGTGATCG CCGATACCGG CGAGGACGCC
ATCGTTTACT GTCCGACGTC CGACTACGCC GCCAATATGG AAGCGGCCGA GGCGCTGCCG
CTGCTGGCAA CGCGTGCCGC GCCGGCCGAG GAATTGAAGA AAACTTCGAC GCCCGAGAAG
GCCAAGTGCG AGCACGTCGC CGAATTCCTG GGCATCCCGC TGGAACGCAC GGTCAAGTCG
ATCGTGCTGG CCACCGACAG CGACGCCGGG GCCCAGATCT GGCTGCTGCT GATCCGTGGC
GATCACGAAC TGAACGAGGT GAAGGCGTCG AAGGTGCCGG GCCTGGCTGA CTTCCGCTTT
GCGACTGAGA CCGAAATCGT CGATACCTTC GGCTCGCCCC CGGGCTACCT CGGTCCGATC
GGTCCGAAGA AGCCGGTCAA GGTGGTGGCG GATCGTACCG TCGCCAACAT GAGCGACTTC
TGCTGTGGTG CCAACGATCG CGACTACCAC TACACCGGTG TGAACTGGGG CCGCGACCTG
CCGGAACCGG CTGTGGCGGA CCTTCGCAAC GTGGTGGCCG GCGACGCCTC GCCGGACGGC
AAGGGCACGC TTGACATCTG CCGTGGCATC GAAGTGGGCC ACGTGTTCAT GCTCGGCACG
CGCTATTCGG AGTCGATGAA CGCCACGTTC CTGGACGAGA ACGGCAAGAC GCAGCCGATG
CAGATGGGTT GCTACGGCAT CGGCGTGACG CGGATTCTGG GCGCCGCCAT CGAGCAGAAC
TATGACGAGC GAGGCATCAT CTGGCCGGCG GCGATCGCCC CGTTCGCGGT GGTGGTGTGC
CCGGTTGGCT ACGATCGCAA CGAGGCCGTC AAGGCCGAGG CCGATCGCAT CCACGCCGAG
CTGCTGGCTG CGGGCGTCGA CGTGATTCTG GACGACCGTG GCGAGCGCCC GGGCGTGATG
TTTGCCGACT GGGAACTGAT TGGCGTGCCG CACCGTGTGG TGGTGGGTGA CCGTGGCCTC
AAGGAAGGCA AAGTCGAGTA CCAGGGCCGC CGTGACGCCC AGGCCACCCC GGTGGCGGTG
GCGGATGTGG TTGCGCACGT GCGCGGCCAG CTGGCTGCCT GA
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| Protein sequence | MKASQFFIST LKEAPADAEI VSHKLMMRAG MIKKLGAGIY NYMPVGLRVI RKVENIVREE
MNRAGAVELS MPVIQPAELW QETGRWDKMG PELLRLKDRH ERDFAVQPTS EEVVTDIART
EIRSYKQLPV NFYQIQTKFR DERRPRFGIM RGREFTMKDA YSFDRDIDGL KASYQNMYDA
YVRIFQRFGL EFRAVAADNG AIGGSGSHEF HVIADTGEDA IVYCPTSDYA ANMEAAEALP
LLATRAAPAE ELKKTSTPEK AKCEHVAEFL GIPLERTVKS IVLATDSDAG AQIWLLLIRG
DHELNEVKAS KVPGLADFRF ATETEIVDTF GSPPGYLGPI GPKKPVKVVA DRTVANMSDF
CCGANDRDYH YTGVNWGRDL PEPAVADLRN VVAGDASPDG KGTLDICRGI EVGHVFMLGT
RYSESMNATF LDENGKTQPM QMGCYGIGVT RILGAAIEQN YDERGIIWPA AIAPFAVVVC
PVGYDRNEAV KAEADRIHAE LLAAGVDVIL DDRGERPGVM FADWELIGVP HRVVVGDRGL
KEGKVEYQGR RDAQATPVAV ADVVAHVRGQ LAA
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