Gene Rmet_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3089 
Symbol 
ID4039917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3346969 
End bp3347571 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID637978488 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_585230 
Protein GI94312020 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG CCGCAGGCCG GGTCCGCGAC TGGCGGCCCA ACGCCGACGG CTGGGTCCCC 
GCAGCCCGCC ACGTGCCGTC CCCGAACTTC GACGCCCGCC CCGAAGGCAT GGCGGTCGAT
GTGGTGGTAC TGCACAACAT CAGCCTGCCG CCGGGGCAGT TCGGCTCCGA CGATATCGAG
GCGTTCTTCC AGAATCGGCT CGATGCCACG CGCCATCCGT TTTTCGAGAC GATTCGCGAT
GTCCGGGTAT CGGCCCACTT CCTGATCCGT CGCGATGGCG AGCCGGTTCA GTTTGTCGCC
TGCACACAAC GTGCGTGGCA CGCCGGCCAG TCCGACTATT GCGGACGCCA ACGCTGCAAC
GACTTCTCGA TCGGCATCGA GATCGAGGGC ACCGACGACC AGCCGTTCAC GCCAGCTCAG
TACGAGACGG TCGCCGCGCT GGTGAGTGCC CTGCGGGCCG CCTATCCGAT CCAGGGCGTC
GCTGGCCACA GCGACATTGC TCCGGGACGC AAGACCGACC CAGGCCCCTA CTTCGACTGG
AGCCGCTTTG CGAAACAGGC CGCGCTGCCG CTGGCGATGA TGCCGTACCG GCAGGCAAGG
TAG
 
Protein sequence
MSDAAGRVRD WRPNADGWVP AARHVPSPNF DARPEGMAVD VVVLHNISLP PGQFGSDDIE 
AFFQNRLDAT RHPFFETIRD VRVSAHFLIR RDGEPVQFVA CTQRAWHAGQ SDYCGRQRCN
DFSIGIEIEG TDDQPFTPAQ YETVAALVSA LRAAYPIQGV AGHSDIAPGR KTDPGPYFDW
SRFAKQAALP LAMMPYRQAR