Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3089 |
Symbol | |
ID | 4039917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3346969 |
End bp | 3347571 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637978488 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_585230 |
Protein GI | 94312020 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGACG CCGCAGGCCG GGTCCGCGAC TGGCGGCCCA ACGCCGACGG CTGGGTCCCC GCAGCCCGCC ACGTGCCGTC CCCGAACTTC GACGCCCGCC CCGAAGGCAT GGCGGTCGAT GTGGTGGTAC TGCACAACAT CAGCCTGCCG CCGGGGCAGT TCGGCTCCGA CGATATCGAG GCGTTCTTCC AGAATCGGCT CGATGCCACG CGCCATCCGT TTTTCGAGAC GATTCGCGAT GTCCGGGTAT CGGCCCACTT CCTGATCCGT CGCGATGGCG AGCCGGTTCA GTTTGTCGCC TGCACACAAC GTGCGTGGCA CGCCGGCCAG TCCGACTATT GCGGACGCCA ACGCTGCAAC GACTTCTCGA TCGGCATCGA GATCGAGGGC ACCGACGACC AGCCGTTCAC GCCAGCTCAG TACGAGACGG TCGCCGCGCT GGTGAGTGCC CTGCGGGCCG CCTATCCGAT CCAGGGCGTC GCTGGCCACA GCGACATTGC TCCGGGACGC AAGACCGACC CAGGCCCCTA CTTCGACTGG AGCCGCTTTG CGAAACAGGC CGCGCTGCCG CTGGCGATGA TGCCGTACCG GCAGGCAAGG TAG
|
Protein sequence | MSDAAGRVRD WRPNADGWVP AARHVPSPNF DARPEGMAVD VVVLHNISLP PGQFGSDDIE AFFQNRLDAT RHPFFETIRD VRVSAHFLIR RDGEPVQFVA CTQRAWHAGQ SDYCGRQRCN DFSIGIEIEG TDDQPFTPAQ YETVAALVSA LRAAYPIQGV AGHSDIAPGR KTDPGPYFDW SRFAKQAALP LAMMPYRQAR
|
| |