Gene Rmet_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3087 
Symbol 
ID4039915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3342183 
End bp3343370 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content62% 
IMG OID637978486 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_585228 
Protein GI94312018 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCT GGGACGACGA CGTTCAAGCC ACACCGCAGG CCGCGCCGCA GCCTGCCCTG 
CAACCCGCTG CCGTCGCCAC GTCGGTCGAC CAGCAAGGCG TGCTGCCGCC GGCAGCCACC
GAGCCGGGCA TCCTCGGCAA CAACCCCAAC GCCGCCGCCG CGCAAAGCAC GCGCCGCGTG
AACGCCGCCG ACAAGCGCGT GATCAACGGC GCCACGGACG TGAACCAGCT CGTGCCGTTC
AAGTACAAGT GGGCATGGGA AAAGTATCTG GCCGGTTGCG CGAACCACTG GATGCCGCAG
GAAATCAACA TGTCGCGCGA CATCGCCCTG TGGAAGGACC CGAACGGCCT GACCGAGGAC
GAGCGCCGCA TCATCAAGCG CAACCTGGGC TTCTTCGTGA CGGCCGATTC GCTGGCCGCC
AACAATATCG TGCTGGGCAC GTACCGCCAG ATCACGGCGC CGGAATGCCG CCAGTACCTG
TTACGCCAGG CCTTCGAAGA GGCCATCCAC ACGCACGCGT ACCAGTACAT CGTGGAATCG
CTCGGTCTGA ACGAAGCCGA GATCTTCAAC GCGTACCATG AAGTGCAGTC GATCCGCGAC
AAGGACGAGT TCCTGATCCC GTTCATCGAC ACGCTGACCG ACCCGTCGTT CAAGACCGGC
ACGCCGGAGA ACGACCAGAA GCTGCTGAAG TCGCTGATCG TGTTCGCCTG CATTATGGAA
GGCCTGTTCT TCTACGTGGG CTTCACGCAG ATCCTGGCGA TGGGCCGCCA GAACAAGATG
ACCGGCGCTG CCGAGCAGTA CCAGTACATC CTGCGCGACG AATCCCTGCA CTGCAATTTC
GGCATCGACC TGATCAACCA GATCAAGCTC GAGAACCCGC ACCTGTGGAC GGCCGAGTTC
AAGGCCGAGA TCACCGAGCT GTTCAAGAAG GCCGTGGACC TGGAATACCG CTACGCCGAG
GACACCATGC CGCGCGGCGT GCTGGGCCTG AACGCACCGA TGTTCAAGGG CTACCTGCGC
TTCATCTGCA ACCGCCGTTG CCAGCAGATC GGCCTGGACC AGCTCTTCCC GAACGAGGAA
AACCCGTTCC CGTGGATGAG CGAAATGATC GACCTGAAGA AAGAGCGTAA CTTCTTCGAG
ACGCGCGTCA TCGAGTACCA GACGGGCGGC GCGCTGTCGT GGGATTGA
 
Protein sequence
MLSWDDDVQA TPQAAPQPAL QPAAVATSVD QQGVLPPAAT EPGILGNNPN AAAAQSTRRV 
NAADKRVING ATDVNQLVPF KYKWAWEKYL AGCANHWMPQ EINMSRDIAL WKDPNGLTED
ERRIIKRNLG FFVTADSLAA NNIVLGTYRQ ITAPECRQYL LRQAFEEAIH THAYQYIVES
LGLNEAEIFN AYHEVQSIRD KDEFLIPFID TLTDPSFKTG TPENDQKLLK SLIVFACIME
GLFFYVGFTQ ILAMGRQNKM TGAAEQYQYI LRDESLHCNF GIDLINQIKL ENPHLWTAEF
KAEITELFKK AVDLEYRYAE DTMPRGVLGL NAPMFKGYLR FICNRRCQQI GLDQLFPNEE
NPFPWMSEMI DLKKERNFFE TRVIEYQTGG ALSWD