| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2935 |
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| Symbol | |
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| ID | 4039763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3189873 |
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| End bp | 3191018 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637978335 |
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| Product | twitching motility protein |
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| Protein accession | YP_585077 |
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| Protein GI | 94311867 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0429351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC TCGACCGCGA ATCCGCTGCA AAGTACATCA ACGAAATGCT GGGGCTGATG
GTCAAGAACC GTGGCTCCGA TCTGTTCATC ACTGCGGAAT TTCCTCCGGC CGTCAAGGTC
GACGGCAAGA TCACGCCGGT TTCCCAGCAG CCGTTGAACC CGACCCACGC GCTTACCCTG
GTGTGCTCGA TCATGAACGA GCGCCAGACC AAGGAGTTCG AGGACACCCG CGAATGCAAT
TTCGCGATCG CCGTGCCGGA CGTCGGACGT TTCCGTGTCT CGGCCTTCAT CCAGCAAGGC
CGCGCGGGCA TGGTGCTGCG GACCATCAAC ACCCGCATTC CATCGGTCGA AGACCTGGAC
CTGCCGCCGA CGCTGCATGA GATCGTGATG TCCAAGCGCG GTCTGGTGAT CGTCACCGGC
GCCACTGGCT CGGGCAAGTC GACCTCGCTG GCGGCCATGC TCGACCACCG CAACGCGCAT
TCGTACGGCC ACATCATCAC GATCGAGGAC CCGATCGAAT ACGTCCACGC GCATCAGAAC
TGCATCGTCA CGCAGCGCGA GGTGGGGATC GACACCGAGT CGTGGCACGT CGCGCTCAAG
AACACGCTGC GCCAGGCGCC GGACGTGATC CTGATCGGCG AAATCCGCGA TCGCGACACG
ATGGAATACG CGATGCAGTA CGCGGAAACG GGCCACCTTT GCCTGGCCAC GCTGCACGCG
AACAACGCCA ATCAGGCGAT CGACCGTATC GTCAACTTCT TCCCAGAGGA AAAGCGCCAG
CAGCTTCTGA TCGACCTGTC GCTGAACCTG AAGGCGATGA TTTCGCAGCG CCTGCTGCCG
CGTGCCGGCC GCAAGGGCCG CGTGCCGGCG GTGGAGATCA TGATCGGCAC GCCGCTAGTG
GCTGACCTGA TCTTCAAGGG CGAGATTCAC GAGCTCAAGG AAGTCATCAA GAAGTCGCGC
GAGCAGGGCA TGATCTCGTT CGACCAAGCG CTGTTCGAAC TCTACGAGAC GGAGAAGATC
ACGTACGAAG ACGCGCTCAA GAACGCTGAC TCGCTCAACG ACCTGCGCCT GATGATCAAA
CTCCACAGCA AACGCCATCG CGACAACGAT CTCGGCGCCG GCACCGAACA CCTGAACGTG
ATCTGA
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| Protein sequence | MTMLDRESAA KYINEMLGLM VKNRGSDLFI TAEFPPAVKV DGKITPVSQQ PLNPTHALTL
VCSIMNERQT KEFEDTRECN FAIAVPDVGR FRVSAFIQQG RAGMVLRTIN TRIPSVEDLD
LPPTLHEIVM SKRGLVIVTG ATGSGKSTSL AAMLDHRNAH SYGHIITIED PIEYVHAHQN
CIVTQREVGI DTESWHVALK NTLRQAPDVI LIGEIRDRDT MEYAMQYAET GHLCLATLHA
NNANQAIDRI VNFFPEEKRQ QLLIDLSLNL KAMISQRLLP RAGRKGRVPA VEIMIGTPLV
ADLIFKGEIH ELKEVIKKSR EQGMISFDQA LFELYETEKI TYEDALKNAD SLNDLRLMIK
LHSKRHRDND LGAGTEHLNV I
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