Gene Rmet_2922 details

Gene Information

• Locus tag: Rmet_2922
• Symbol: dnaK
• ID: 4039750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cupriavidus metallidurans CH34
• Kingdom: Bacteria
• Replicon accession: NC_007973
• Strand: -
• Start bp: 3176581
• End bp: 3178527
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637978322
• Product: molecular chaperone DnaK
• Protein accession: YP_585064
• Protein GI: 94311854
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0797914
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGTAAGA TCATCGGTAT CGACCTCGGT ACCACCAACA GCTGCGTGTC CATTCTGGAA 
GGCAACACGC CGAAAGTCAT CGAGAACTCC GAAGGCGCAC GCACCACGCC GTCGATCATC 
GCCTACATGG AAGATGGCGA GATCCTGGTT GGTGCGCCTG CCAAGCGCCA GGCCGTCACC 
AACCCGCGTA ACACGCTGTA CGCGGTGAAG CGCCTGATCG GCCGCAAGTT CGAAGAGAAG 
GAAGTCCAGA AGGACATCGG CCTGATGCCG TACGCGATCG TCAAGGCCGA CAACGGCGAC 
GCCTGGGTTG GCGTGCGCGA CCAGAAGCTG GCCCCGCCGC AGGTTTCGGC CGAAGTGCTG 
CGCAAGATGA AGAAGACCGC CGAGGACTAC CTGGGCGAGC CCGTGACCGA AGCCGTGATC 
ACGGTGCCGG CGTACTTCAA CGACTCGCAG CGCCAGGCAA CCAAGGATGC CGGCCGCATC 
GCCGGGCTGG ACGTCAAGCG CATCATCAAC GAACCGACCG CTGCAGCGCT GGCGTTCGGC 
ATGGACAAGA ACGAGAAGGG CGACCGCAAG ATTGCCGTGT ATGACCTCGG CGGCGGCACG 
TTCGACATCT CGATTATCGA AATCGCCGAC GTGGATGGCG AAAAGCAGTT CGAAGTGCTG 
TCGACCAACG GCGACACGTT CCTCGGTGGC GAGGACTTCG ACCAGCGCAT CATCGACTAC 
ATCATCGGCG AGTTCAAGAA GGAACAGGGC GTCGATCTGT CGAAGGACGT GCTGGCGCTG 
CAACGCCTGA AGGAAGCCGC TGAAAAGGCC AAGATCGAAC TGTCGAGCTC GCAGCAGACC 
GAGATCAACC TGCCGTACAT CACGGCCGAT GCCTCGGGTC CGAAGCACTT GAACCTGAAG 
ATCACGCGCG CCAAGCTCGA AGCGCTGGTG GAAGAACTGA TCACCCGCAC GATCGAACCG 
TGCCGTACCG CGATCAAGGA TGCAGGCGTC AAGGTCAGCG ACATTGATGA CGTGATCCTG 
GTCGGCGGCA TGACCCGTAT GCCGAAGGTG CAGGAACAGG TGCGCGAGTT CTTCGGCAAG 
GAAGCCCGCA AGGACGTGAA CCCGGACGAA GCCGTGGCCG TGGGTGCCGC CATCCAGGGT 
TCGGTGCTGT CGGGCGACCG TACCGACGTG CTGCTGCTGG ACGTGACGCC GCTGTCGCTG 
GGCATCGAAA CGCTGGGTGG CGTGATGACC AAGATGATCA ACAAGAACAC GACCATCCCG 
ACCAAGCACG CACAGGTTTT CTCGACCGCT GACGACAATC AGCCGGCCGT GACGATCAAG 
GTGTACCAGG GCGAGCGCGA GATGGCCACC GGCAACAAGA TGCTGGGCGA GTTCAACCTG 
GAAGGCATTG CGCCGGCACC GCGTGGCACG CCGCAGATCG AGGTCTCGTT CGACATCGAC 
GCCAACGGCA TTCTGCATGT GGGCGCCAAG GACAAGGCCA CCGGCAAGGA AAACCGCATC 
ACGATCAAGG CGAACTCGGG TCTGTCGGAA GACGAGATCC AGCGCATGGT GAAGGATGCC 
GAAGCCAATG CCGAGGAAGA CAAGCGCGCC CGTGAGCTGG CCGATGCCCG CAACCAGGCC 
GACGCGCTGA TCCACTCGAC GCGCAAGGCG CTGGGCGAGT ACGGCGAGAA GCTCGAAGCT 
GGCGAGAAGG AAAAGATCGA AGCCGCGATC AAGGACCTGG AAGACGCCGC CCGCGGCGGT 
GACAAGGCCG AGATCGATGC CAAGGTCAAC GCGCTGTCCG AAGCCAGCCA GAAGCTGGGC 
GAGAAGGTCT ACGCCGACAT GCAGGCCCAG GCCGGTGAAG GTGCGGCGGC AGGTGCCGGC 
GCAGCCGGCG GCGCTCAGCA GCAGGCCCAG CCGCAGGACG ACAACGTCGT GGATGCCGAG 
TTCAAGGAAG TGAACGACAA GAAGTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVSILE GNTPKVIENS EGARTTPSII AYMEDGEILV GAPAKRQAVT 
NPRNTLYAVK RLIGRKFEEK EVQKDIGLMP YAIVKADNGD AWVGVRDQKL APPQVSAEVL 
RKMKKTAEDY LGEPVTEAVI TVPAYFNDSQ RQATKDAGRI AGLDVKRIIN EPTAAALAFG 
MDKNEKGDRK IAVYDLGGGT FDISIIEIAD VDGEKQFEVL STNGDTFLGG EDFDQRIIDY 
IIGEFKKEQG VDLSKDVLAL QRLKEAAEKA KIELSSSQQT EINLPYITAD ASGPKHLNLK 
ITRAKLEALV EELITRTIEP CRTAIKDAGV KVSDIDDVIL VGGMTRMPKV QEQVREFFGK 
EARKDVNPDE AVAVGAAIQG SVLSGDRTDV LLLDVTPLSL GIETLGGVMT KMINKNTTIP 
TKHAQVFSTA DDNQPAVTIK VYQGEREMAT GNKMLGEFNL EGIAPAPRGT PQIEVSFDID 
ANGILHVGAK DKATGKENRI TIKANSGLSE DEIQRMVKDA EANAEEDKRA RELADARNQA 
DALIHSTRKA LGEYGEKLEA GEKEKIEAAI KDLEDAARGG DKAEIDAKVN ALSEASQKLG 
EKVYADMQAQ AGEGAAAGAG AAGGAQQQAQ PQDDNVVDAE FKEVNDKK