| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2892 |
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| Symbol | |
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| ID | 4039720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3147104 |
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| End bp | 3149401 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637978292 |
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| Product | ATP-dependent Clp protease ATP-binding subunit ClpA |
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| Protein accession | YP_585034 |
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| Protein GI | 94311824 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.237533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGC AAGAATTGGA AGTGAGCCTG CACATGGCCT TCGTCGAGGC TCGCCAGGCG
CGCCACGAGT TCATCACCGT GGAACACCTG CTGCTGGCGT TGCTCGACAA CCCCACGGCG
GCCGAGGTGC TGCGCGCGTG CGCAGCCAAC ATCGAGGACT TGCGCACTAG TCTGAAGAAC
TTCATCGCCG ACAACACGCC GGTCGTGCCC GGCACCGATG AAGTGGACAC ACAGCCGACA
CTCGGTTTCC AGCGAGTGAT CCAGCGCGCC ATCATGCATG TGCAGTCGAC CTCCAACGGC
AAGAAGGAGG TGACTGGCGC AAACGTGCTG GTGGCGATCT TCGGCGAGAA GGATTCCCAC
GCGGTCTACT ACCTGCAGCA GCAGGGCGTC ACGCGCCTGG ACGTGGTGAA TTTCATCAGC
CACGGCATCC GCAAGGATCA GGCCGAGCCC GCCAAGCATG GCGACGGCAA CGCCGAAGGC
GAGGGCGGTG ACGGCAAGGA AAGCCCGCTC GAGCAATACA CCCAGAACCT GAACACGCTG
GCCAAGGCCG GCAAGATCGA TCCGCTGATC GGCCGCGAAA GCGAAGTCGA GCGCGTTGTC
CAGGTGCTGT GCCGCCGCCG CAAGAACAAC CCGCTGCTGA CCGGCGAGGC CGGCGTGGGC
AAGACGGCGA TCGCCGAAGG TCTGGCCTGG CGCATCACCA AGGGCGAGGT GCCGGATATC
CTGGAAAAGG CCGTGGTGTA CTCGCTCGAC ATGGGCGCGC TGCTGGCCGG CACCAAGTAC
CGTGGCGACT TCGAGCAGCG CCTCAAGGGT GTGCTGAAGT CGCTCAAGGA CAATCCGAAC
GCGATCCTGT TCATCGACGA GATCCACACG CTGATCGGCG CGGGCGCCGC ATCGGGCGGC
ACGCTGGACG CCAGCAACCT GCTGAAACCG GCGCTGTCGT CGGGGCAGCT CAAGTGCATC
GGCGCGACCA CGTTCACCGA GTACCGTGGC ATCTTCGAGA AGGATGCGGC GTTATCGCGT
CGATTCCAGA AGATCGACGT GGTCGAGCCT TCGGTAGACC AGACCGTGCA GATTCTGCGT
GGCCTGAAGT CGCGCTTCGA GGAGCATCAC GGCGTCAAAT ACGCGGCCTC GGCGCTGACC
GCGGCGGCCG AACTGTCGGC ACGCTTCATC ACGGACCGTC ATCTGCCGGA CAAGGCGATC
GATGTGATCG ATGAAGCGGG TGCGGCACAG CGCATCCTGC CGAAGTCGAA GCAGAAGAAG
ACGATCGGCA AGGCCGAGAT CGAGGACATC GTGTCGCGCA TCGCGCGTAT CCCGCCGCAA
AGCGTGAACC AGGACGACCG CAGCAAGTTG CAGACGCTGG AACGCGACCT GAAGTCGGTG
GTGTTCGGTC AGGACCCGGC CATCGAGGCG CTGGCTTCGG CGATCAAGAT GTCGCGTGCT
GGCCTGGGCA AGACCGACAA GCCGATCGGC TCGTTCCTGT TCTCGGGCCC GACCGGCGTC
GGCAAGACCG AAGTGGCCAA GCAGCTCGCG TTCATCATGG GCATTGAGTT GCTGCGCTTC
GACATGTCCG AATACATGGA GCGCCACGCG GTGAGCCGCC TGATCGGCGC GCCCCCGGGC
TATGTCGGTT TCGACCAGGG CGGCCTGCTG ACCGAGGCCG TCACGAAGAA GCCGCACTGC
GTGCTCCTGC TCGACGAGAT CGAAAAGGCA CATCCGGATA TCTTCAACAT CCTGCTGCAG
GTCATGGACC ACGGTTCGCT CACCGACAAC AACGGTCGCC GTGCCGACTT CCGCAACGTG
ATCATCATCA TGACCACCAA TGCGGGCGCC GAGACGATGA ACCGTGCCAC GATCGGCTTC
ACCACCGCCC GCGAGCAGGG CGACGAAATG GCCGATATCA AGCGGATGTT CACGCCCGAG
TTCCGTAACC GGCTCGATGC AATGATCAGC TTCCGCTCGC TGGATGAGGA AATCATTCTG
CGCGTGGTGG ACAAGTTCCT GATGCAGCTG GAAGAGCAAC TGCACGAGAA GAAGGTGGAT
GCCAGCTTCT CGGAGAAGCT GCGCAAGTAT CTGGCGAAGA AGGGCTTCGA TCCACTGATG
GGTGCCCGTC CGATGCAGCG TCTGATCCAG GACATGATCC GCAAGGCGCT GGCCGACGAG
CTGCTGTTTG GCAAGCTTGT CAGCGGCGGC AAGGTCGCGG TGGACCTGGA CGATGACGAC
CAGATCAAGC TGACGTTCTC CGAAGCGGAT CCGGAGCCGC CCGAGGCGCC GGAAAGCGAG
CAGCGCGCAG AAGTCTGA
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| Protein sequence | MIAQELEVSL HMAFVEARQA RHEFITVEHL LLALLDNPTA AEVLRACAAN IEDLRTSLKN
FIADNTPVVP GTDEVDTQPT LGFQRVIQRA IMHVQSTSNG KKEVTGANVL VAIFGEKDSH
AVYYLQQQGV TRLDVVNFIS HGIRKDQAEP AKHGDGNAEG EGGDGKESPL EQYTQNLNTL
AKAGKIDPLI GRESEVERVV QVLCRRRKNN PLLTGEAGVG KTAIAEGLAW RITKGEVPDI
LEKAVVYSLD MGALLAGTKY RGDFEQRLKG VLKSLKDNPN AILFIDEIHT LIGAGAASGG
TLDASNLLKP ALSSGQLKCI GATTFTEYRG IFEKDAALSR RFQKIDVVEP SVDQTVQILR
GLKSRFEEHH GVKYAASALT AAAELSARFI TDRHLPDKAI DVIDEAGAAQ RILPKSKQKK
TIGKAEIEDI VSRIARIPPQ SVNQDDRSKL QTLERDLKSV VFGQDPAIEA LASAIKMSRA
GLGKTDKPIG SFLFSGPTGV GKTEVAKQLA FIMGIELLRF DMSEYMERHA VSRLIGAPPG
YVGFDQGGLL TEAVTKKPHC VLLLDEIEKA HPDIFNILLQ VMDHGSLTDN NGRRADFRNV
IIIMTTNAGA ETMNRATIGF TTAREQGDEM ADIKRMFTPE FRNRLDAMIS FRSLDEEIIL
RVVDKFLMQL EEQLHEKKVD ASFSEKLRKY LAKKGFDPLM GARPMQRLIQ DMIRKALADE
LLFGKLVSGG KVAVDLDDDD QIKLTFSEAD PEPPEAPESE QRAEV
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