Gene Rmet_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2874 
Symbol 
ID4039702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3123820 
End bp3124974 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content64% 
IMG OID637978274 
Productquinolinate synthetase 
Protein accessionYP_585016 
Protein GI94311806 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAC AAACGATCAA GAGCGTCGAG TTCGAGAAGC CGAACCTGAC GGACCCTGAC 
GCGGCCGCCG GTGGTAGCTG CGTCGCGCAC GCCTGGGCCA AGGTGCCCCC GGCGCTGACA
CCCGATGAGC GCCAGGCGCT CAAGTCCCGC ATTCGCAAGT TGCTGAAAGA GCGCAATGCG
GTGCTGGTAG CGCATTACTA CGTCGATGCC GACCTGCAGG ATCTTGCCGA GGAAACCGGC
GGCTGCGTGT CCGATTCGCT GGAAATGGCC CGCTTCGGGC GCGATCACGA TGCCAAGACG
CTCGTGGTGG CCGGTGTACG ATTCATGGGC GAGACCGCCA AGATCCTGAG CCCCGAGAAG
ACCATCCTGA TGCCGGATCT GGACGCCACC TGCTCGCTGG ACCTGGGCTG CCCGGCCGAC
GATTTCTCGG CATTCTGCGA TGCGCACCCG GATCGCACCG TGGTGGTCTA TGCCAACACC
AGCGCGGCGG TGAAGGCGCG CGCCGACTGG ATGGTGACGT CGAGCATCGG CCTGAAGATC
GTCGAGCATC TGCACGCGCG CGGCGAGAAG ATCCTGTGGG CGCCGGACAA GCATCTGGGC
AGCTACATCC AGCAGCAGAC CGGCGCCGAC ATGCTGTTGT GGCAGGGCTC GTGCCTGGTG
CACGACGAGT TCAAGGGTAT CGAACTCGAT CTGCTGCGCC GCGAGCATCC GAAGGCCAAG
ATCCTGGTCC ACCCGGAGTC GCCGGCCAAC GTGGTTGCGC AGGCTGACGT GGTTGGCTCG
ACCAGCCAGC TGATCGCCGC GGCCCAGCAG TTGGACGCCA ACGAGTTCAT CGTTGCCACC
GATAACGGCA TCCTGCACAA GATGCGTATG GCCGCGCCGG GCAAGATGTT CATCGAGGCC
CCGACCGCCG GCAACAGCGC CACCTGCAAG AGCTGCGCGC ATTGCCCGTG GATGGCCATG
AATGCGCTGA CCAATCTGGC CGAAGTCCTC GAGACCGGCC GCAACGAAAT TCACGTCGAC
GCCGACATCG GACGACGCGC CGTAACGTGT ATCAACCGGA TGCTCGATTT CGCCGCGCAG
CAGAAAGCCA ATGTTCGCCC CGCAGCCGAT CTCGCCAAGG AATCGGCACT GTTCAGCGGA
GTTGGCCCGG CATGA
 
Protein sequence
MTPQTIKSVE FEKPNLTDPD AAAGGSCVAH AWAKVPPALT PDERQALKSR IRKLLKERNA 
VLVAHYYVDA DLQDLAEETG GCVSDSLEMA RFGRDHDAKT LVVAGVRFMG ETAKILSPEK
TILMPDLDAT CSLDLGCPAD DFSAFCDAHP DRTVVVYANT SAAVKARADW MVTSSIGLKI
VEHLHARGEK ILWAPDKHLG SYIQQQTGAD MLLWQGSCLV HDEFKGIELD LLRREHPKAK
ILVHPESPAN VVAQADVVGS TSQLIAAAQQ LDANEFIVAT DNGILHKMRM AAPGKMFIEA
PTAGNSATCK SCAHCPWMAM NALTNLAEVL ETGRNEIHVD ADIGRRAVTC INRMLDFAAQ
QKANVRPAAD LAKESALFSG VGPA