Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2789 |
Symbol | |
ID | 4039615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3035218 |
End bp | 3037314 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978188 |
Product | TonB-dependent receptor |
Protein accession | YP_584931 |
Protein GI | 94311721 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.973502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCC GAAGGTGGCA TACCCCATCG CCATATGGCC CGCGGGGGAA CGGGCCTGGC CGTTCTCTTC CATCCCTGCT CATGCGTTCC ACGCTATCCA GGTCGACCGC CGCGCTGAAG CCGTCGGTTC GCCCCTCCAT GCCCGCCATC CTGGCGGCCA TCGCCCTTTT TCCGTCCGCA TCGGTCTTCG CGCAGGACGC GACGCCAGAT GAGTCGTCGA CCACCACGCC GGCCAGCGCA TCGGCCAATG GTCCCGCTCC CGCTTCCGCA CCGGCAGCCG CACCGGCCGC CGCGCAGGCG GCCAGCGGGC AGACGCTGGC GCCCGTAGTC GTCACCGCCT CCCGAACCGC GCAGTCGGTG ACCGAGGCCC TGCCGCACAC CACGGTGGTC ACCCAGGAAG ACATCGTCAA CTCACAGGCT CCGGACCTGC GCTCGCTACT GCGCAACCAG GCGGGCGTGG AGTTCTCGAC CAACGGCGGC ATGGGTACCA ATACCTCGCT GTTCATGCGC GGCGCCAATT CGAACCAGGT GCTGATCATG ATCGACGGCG TGCGGATTTC CGGCGTCAGC AACGGTAATG CGCAGATCGC CAATATCTTG CCCGACCAGA TCGACCATAT CGAAGTGGTG CGCGGCAACG TCTCGGCGCT CTATGGCTCC GACGCCGTTG GTGGCGTGGT GCAGATCTTC ACCAAGAGTG GCGCGGGCCA GGCGCCTGCC GCCAACGCGC AGGTGGAGTA CGGCAGCAAC AATACCCGCC AGGGCACGGT GGGTTACGGT GGCCAGATCG GTGCCACCTC GTTCAACGTC ACCGGCTCGA TGTACAAGAC CGATGGCTTC TCGGCCATCA ATGCGGCGCA GTGGAACGCC GACAATCCGA AGAGCGCCGC GCGCGGTATC GGCCCGAATC CGGCCAACAA CCCGTACGAG AACAAGAGCA TCTCGGGCCA GATCAAGCAC CAGTTCACGC AGGACTGGGA CGCTGGCGTC GCGACCTACT ACTCGAACAG CCAGCTTTCC TACGACAACG CCTACGGCAA GCCGACCGAC GACTACCGCA TGGATAGCAA GCTCTACACG CTGTCCGCGT TCGTCAACGG CAAGGTGCTA TCTGACTGGA CCACGCATTT CAAGGTTGCG CAAAGCGAAG ACCGCAGCGA AGGCACGATC AACGGCCTGT TCGACAGCCT GTTCAGCACG CGCACCCGCC AGTTCAACTG GCAGAACGAG TACGCGCTGA CACCCGACCA TACGCTGATG TTTGGCACGG ACTGGCTGCA GCAGGAGCTG GCTTCGAGCT CGTACAACGC GCCGTCGCGC AATGTGTTTT CGGTCTATGG CGGCTACGAG GGGCGTATCG GCAAGCACCA GATCCAGTTG AACGGCCGTA ACGACCACTA TTCCGATTTC GGCGACCAGG GCAGCTTCTT CGCCGGCTAC GGCTACTACC TGACCAGCGC GGTCAAGTTG CTTGCCAACG TCAGCAATGC GTTCCGCGCG CCGACGTTCA ACGAGCTCTA CTACCCGTAC TACGGCCAGC CGAACCTGCA GCCCGAGCGC GCCAAGTCGG CGGAGGTGGG GGTGCAGGTG GAGACGGCGT CGACCGGCCT GCTGCGCGTG ACCGCGTTCG AGACGCGCTA CAACGACCTG ATCGTCTCCG CGTTGCAGCC CAGCGGCCTC TACCTGGCGC AGAACGTCAA CAAGGCCAAG GTGCAGGGGA TCGAGGCATC GTGGCGCGCC AGCCTGTGGG GCACTGACGT GGGCGCCAGC GTGACGTTCC AGAATCCGCT GGATGAGACC AACAATACGC AGCTTCTGCG GCGTGCCCGG CGCCATGCGT CGTTCGACGT GGGCCGGAAT TTCGGAAACT GGCGTTTCGG CGGTGAATGG CTGGTATCCT CGGCGCGACT CGACAGCGGT TCGCGCACGC TGGGCGGGTA CGGTATCGTC AACCTGAACG CCCGCTACAA CATCGACAAA CAATGGTTCG TCGCCGCCCG AGTGGAAAAC CTGTTCGACA AGAACTACCA GCTGGCCTAC CCCTACAACA CGCAGGGCAG GGCCGGCTTC ATCACGCTGG GATGGCGTCA GAAGTGA
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Protein sequence | MPRRRWHTPS PYGPRGNGPG RSLPSLLMRS TLSRSTAALK PSVRPSMPAI LAAIALFPSA SVFAQDATPD ESSTTTPASA SANGPAPASA PAAAPAAAQA ASGQTLAPVV VTASRTAQSV TEALPHTTVV TQEDIVNSQA PDLRSLLRNQ AGVEFSTNGG MGTNTSLFMR GANSNQVLIM IDGVRISGVS NGNAQIANIL PDQIDHIEVV RGNVSALYGS DAVGGVVQIF TKSGAGQAPA ANAQVEYGSN NTRQGTVGYG GQIGATSFNV TGSMYKTDGF SAINAAQWNA DNPKSAARGI GPNPANNPYE NKSISGQIKH QFTQDWDAGV ATYYSNSQLS YDNAYGKPTD DYRMDSKLYT LSAFVNGKVL SDWTTHFKVA QSEDRSEGTI NGLFDSLFST RTRQFNWQNE YALTPDHTLM FGTDWLQQEL ASSSYNAPSR NVFSVYGGYE GRIGKHQIQL NGRNDHYSDF GDQGSFFAGY GYYLTSAVKL LANVSNAFRA PTFNELYYPY YGQPNLQPER AKSAEVGVQV ETASTGLLRV TAFETRYNDL IVSALQPSGL YLAQNVNKAK VQGIEASWRA SLWGTDVGAS VTFQNPLDET NNTQLLRRAR RHASFDVGRN FGNWRFGGEW LVSSARLDSG SRTLGGYGIV NLNARYNIDK QWFVAARVEN LFDKNYQLAY PYNTQGRAGF ITLGWRQK
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