| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2755 |
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| Symbol | dcd |
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| ID | 4039581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2996678 |
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| End bp | 2997244 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637978154 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_584897 |
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| Protein GI | 94311687 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000349305 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCA AATCCGACAA GTGGATCCGC CGCATGGCGG AGCAGCACGG CATGATCGAA
CCGTTCGAGC CCGGCCAGGT ACGGGAGTCG GACGGCCGCA AGATCGTGTC CTATGGCACG
TCGAGCTACG GCTACGACAT CCGCTGCGCC GACGAATTCA AGATCTTCAC GAACATCAAC
AGCACGATCG TCGATCCGAA GAACTTCGAC GAGAAGTCGT TCGTGGACTT CAAGGGCGAT
GTCTGCATCA TCCCGCCGAA CTCGTTCGCG CTGGCCCGCA CGATGGAATA CTTCCGGATT
CCGCGCAGCG TGCTGACGAT CTGCCTGGGC AAGAGCACCT ATGCCCGCTG CGGCATCATC
GTCAACGTGA CGCCGTTCGA ACCCGAGTGG GAAGGCTATG TGACGCTTGA GTTCTCCAAC
ACCACGCCGC TGCCCGCCAA GATCTATGCC GGCGAAGGCT GCGCGCAGGT GCTGTTCTTC
GAGAGCGACG AGATCTGCGA GACCTCGTAT GCCGACCGTG GCGGCAAGTA CCAGGGCCAG
CAGGGTGTCA CACTGCCGAA GACCTGA
|
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| Protein sequence | MSIKSDKWIR RMAEQHGMIE PFEPGQVRES DGRKIVSYGT SSYGYDIRCA DEFKIFTNIN
STIVDPKNFD EKSFVDFKGD VCIIPPNSFA LARTMEYFRI PRSVLTICLG KSTYARCGII
VNVTPFEPEW EGYVTLEFSN TTPLPAKIYA GEGCAQVLFF ESDEICETSY ADRGGKYQGQ
QGVTLPKT
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