| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2754 |
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| Symbol | |
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| ID | 4039580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2994254 |
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| End bp | 2996518 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637978153 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_584896 |
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| Protein GI | 94311686 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.135744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCC GCTTCCCCGT CATCATCATC GATGAAGACT TCCGCTCCGA GAACATCTCC
GGCTCGGGCA TTCGCGCGTT GGCCGAGGCC ATCGAGAATG AAGGCATGGA AGTGATGGGT
CTGACCAGCT ATGGCGACTT GACGTCGTTC GCCCAGCAGT CCAGCCGGGC ATCCACGTTC
ATCGTGTCGA TCGACGACGA CGAGTTCGTG CGCGCCGACG ATCAGCCCGA AGCGGCCGCC
ATCGAGAAGC TGCGCGCGTT CGTGACCGAA GTGCGTCGCC GCAACACGGA TCTGCCGATC
TTCCTGTATG GCGAGACGCG CACGTCGCGC CATATTCCGA ACGACATCCT GCGCGAGCTG
CACGGCTTCA TCCACATGTT CGAGGACACC CCCGAATTCG TGGCGCGCCA CATCATCCGC
GAAGCCAAGG TCTACCTGGA TTCGCTGGCC CCGCCGTTCT TCAAGGCGCT GATCGACTAC
GCGCAGGACA GCTCGTACTC GTGGCACTGC CCGGGGCACT CGGGCGGCGT GGCGTTCCTG
AAGAGCCCGG TGGGCCAGGT GTTCCACCAG TTCTTCGGCG AGAACATGCT GCGCGCCGAC
GTCTGCAACG CGGTCGAGGA ACTTGGCCAG CTGCTGGACC ACACCGGCCC GGTGGCGGCG
TCGGAGCGCA ACGCCGCGCG CATCTTCAAT TCCGACCACA TGTTCTTCGT GACCAACGGC
ACGTCGACGT CGAACAAGAT GGTCTGGCAC GCCAACGTGG CGCCGGGCGA CATCGTGGTG
GTGGACCGTA ACTGCCACAA GTCGATCCTG CACGCGATCA TGATGACGGG CGCAATTCCG
GTGTTCCTGA TGCCGACGCG CAACCACTAC GGCATCATCG GCCCGATTCC GAAGAGCGAG
TTCGACCCGG AGACGATCCG CAGGAAGATC GAGAACCATC CGTTCGCGAG CAAGGCGAAG
AACCAGAAGC CGCGCATCCT GACGATCACG CAGGGTACGT ACGACGGCGT GCTGTACAAC
GCCGAGCAGA TCAAGGAAAT GCTGACGTCG GAAATCGACA CGCTGCATTT CGACGAGGCA
TGGCTGCCGC ACGCGGCGTT CCACGATTTC TATCGCGACA TGCACGCGAT CGGCCGTGAC
CGTCCGCGCA GCAAGGACGC GCTGGTGTTC GCCACGCAGT CCACGCACAA GCTGCTGGCC
GGCCTGTCGC AGGCCTCGCA GATCCTCGTG CAGGATTCGG AAACGCGCAA GCTGGATCGC
TACCGCTTCA ACGAGGCGTA TCTGATGCAC ACCTCGACGA GCCCGCAGTA CTCGATCATT
GCCTCGTGCG ACGTGGCCGC GGCGATGATG GAAGCGCCGG GCGGCACCGC GCTGGTCGAG
GAAAGCATCC AGGAAGCGCT GGACTTCCGC CGTGCCGTGC GCAAGGTGGA AGCCGACTAC
GACGTCGCCA ACAATGGCGA CTGGTGGTTC AAGGTGTGGG GCCCGGACGC GCTGGCCGAA
GACGGCATTC CTGACCGCGA AGAGTGGATG CTCAAGGCCA ACGAGCGCTG GCATGGCTTC
GGCGATCTGG CCGATGGTTT CAACCTGCTG GATCCGATCA AGGCCACGAT CATCACCCCG
GGCCTCGACG TGGACGGCGA GTTCAGCGAG CGCGGCATCC CGGCGGCAAT CGTCACGAAG
TACCTGGCCG AGCACGGCAT CATCATCGAG AAGACGGGTC TGTACTCGTT CTTCATCATG
TTCACGATCG GCATCACCAA GGGCCGCTGG AACTCGCTGG TGACCGAGCT GCAGCAGTTC
AAGGACGACT ACGACCAGAA CCAGCCGCTG TGGCGCGTGC TGCCCGAGTT CGTGGGCAAG
CACCCGCAGT ACGAGCGGCT GGGCCTGCGT GATCTGTGCG ACGCGATCCA CAGCGTCTAC
AAGGCCAACG ATGTGGCGCG CGTGACCACC GAGATGTACC TGTCGGACAT GGAGCCGGCG
ATGAAGCCGT CGGATGCCTG GGCGATGATG GCGCATCGCG AAATCGAGCG CGTGCCCGTC
GACGAACTGG AAGGCCGCGT GACCGCGATC CTGCTGACGC CGTACCCGCC GGGCATTCCG
CTGCTGATCC CGGGCGAGCG CTTCAACCGC ACGATCGTGA AGTACCTGAA GTTCGCGCGC
GAGTTCAACA AGCTCTTCCC GGGCTTCGAG ACCGACATCC ACGGCCTGGT CGAGGACGAG
GTCGATGGCC AGAAGGCGTA CTTCGTGGAT TGCGTGAAGC AGTAA
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| Protein sequence | MKFRFPVIII DEDFRSENIS GSGIRALAEA IENEGMEVMG LTSYGDLTSF AQQSSRASTF
IVSIDDDEFV RADDQPEAAA IEKLRAFVTE VRRRNTDLPI FLYGETRTSR HIPNDILREL
HGFIHMFEDT PEFVARHIIR EAKVYLDSLA PPFFKALIDY AQDSSYSWHC PGHSGGVAFL
KSPVGQVFHQ FFGENMLRAD VCNAVEELGQ LLDHTGPVAA SERNAARIFN SDHMFFVTNG
TSTSNKMVWH ANVAPGDIVV VDRNCHKSIL HAIMMTGAIP VFLMPTRNHY GIIGPIPKSE
FDPETIRRKI ENHPFASKAK NQKPRILTIT QGTYDGVLYN AEQIKEMLTS EIDTLHFDEA
WLPHAAFHDF YRDMHAIGRD RPRSKDALVF ATQSTHKLLA GLSQASQILV QDSETRKLDR
YRFNEAYLMH TSTSPQYSII ASCDVAAAMM EAPGGTALVE ESIQEALDFR RAVRKVEADY
DVANNGDWWF KVWGPDALAE DGIPDREEWM LKANERWHGF GDLADGFNLL DPIKATIITP
GLDVDGEFSE RGIPAAIVTK YLAEHGIIIE KTGLYSFFIM FTIGITKGRW NSLVTELQQF
KDDYDQNQPL WRVLPEFVGK HPQYERLGLR DLCDAIHSVY KANDVARVTT EMYLSDMEPA
MKPSDAWAMM AHREIERVPV DELEGRVTAI LLTPYPPGIP LLIPGERFNR TIVKYLKFAR
EFNKLFPGFE TDIHGLVEDE VDGQKAYFVD CVKQ
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