Gene Rmet_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2607 
SymboldnaG 
ID4039433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2836513 
End bp2838354 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content65% 
IMG OID637978008 
ProductDNA primase 
Protein accessionYP_584753 
Protein GI94311543 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.496345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.674189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCCGC AATCCTTTAT TCAGGACCTG CTCAACCGCG TCGACATTGT CGATGTGGTG 
GGCAAGTACG TGCAGTTGAA GAAGGGCGGC GCCAACTTCA TGGGCCTGTG CCCGTTCCAT
AACGAGAAGT CCCCGTCCTT TACCGTATCG CCGACCAAGC AGTTCTATCA CTGCTTCGGC
TGCGGCGCAC ATGGATCCGC CATCGGGTTC CTGATGGAGT ACTCGGGGCA GTCCTACCCC
GACGCGGTGC GTGAGCTGGC CCAGTCGGTC GGCCTGTCCG TGCCGGAGGA GCGCAATAGT
CTGCCACCCG CCCAGCGGGC AGAGCAGCAG GCCAGGTCGT TGGCGCTGAC CGATGCCATG
ACGCGTGCCA CCGACTTCTA CAAGAAGCAG TTGCGCGGTG CCCCGCAGGC CATCCAGTAC
CTCAAGGGCC GTGGCCTGAC CGGCGAGATT GCCGCTCACT TCGGTCTTGG CTACGCGCCG
GACGACTGGC AAGGGCTGGA GACCGTGTTC GGAAGCTATC GCGATGACGC CATCGCCGGT
CCGCTGGTGG AGGCCGGGCT GCTGATCGAG TCCCAGGAGA AGCGCGACGC CGATGGCAAG
CCGCGTCGGT ACGACCGCTT CCGCGATCGC ATCATGTTCC CGATTCGCAA TACGAAGGGC
AATGTGATCG GGTTTGGCGG CCGCGTGATG GGGCAGGGCG AGCCAAAGTA CCTGAATTCA
CCGGAAACGC CGCTCTTCAG CAAGGGAACG GAGCTCTACG GTCTGTTCGA GGCGCGTCAC
GCAATCCGCG AAAATGGCTA CGTGCTGGTG GTAGAAGGCT ACATGGATGT GGTCGCGCTG
GCCCAGCTCG GGTTTGCCAA TGCCGTCGCC ACACTCGGCA CGGCCTGCAC GCCAGTTCAT
GTGCAGAAGC TGATGCGCCA GACCGACGCC GTGGTCTTCT CGTTCGACGG TGACGCCGCT
GGCCGCCGTG CCGCGCGCCG CGCGTTGGAA GCCTGCCTGC CGCACGTGGC GGATAACAAG
ACGATCCGCT TCCTTTTTCT GCCGGCCGAA CACGACCCGG ATAGCTATGT CCGCGAGGAG
GGAACTGACG CGTTCGCGCG CCAGGTTCAG AACGCGATGC CTTTGTCGCG CTTCTTGCTG
CAAATCGTCA CGGAAGATCA GGATCTGCGC CAGCCCGAGG GCCGTGCCCG CGCGCAGTAC
GAGGCCAAGC CGCTGCTTCA GGCGATGCCC GCCGGTGGCT TGCGACTGCA GATCGTGCGC
GAACTTGCCG ATACCACAAG CACCACGCCG GCCGAGATCG AGGCGATTTG CGGCCTGGGC
AGCGATTCCT CGCGGGTTGG TCGTTTCGCC CAGCCGCGCC CGCGCGCGCG GCGTCAGGCG
CCGACCGGGC TCGAGCAGCG CGTGATCCAG TTGCTGATGT GCTACCCGTC GCTGGCGGCC
CGGCTCGACG GGGACGCGCG CGCATTGCTG CTGGACCCCC AGCACTCCGG ATCCGAGGCG
CTGGGCTACT TGGTGTCCGC TTGCGATGGC ATTCAGGGTG AGGTGAACTT TGCGGCCTTC
AGCGAGCAGT TGGCGCAGAC GCCCTACGCC GATGTCTACG CGAGCGCACG CACGGCGGTA
CTGCGCGAGG AAATCGAAGA GGAGCCGGCG ACGCATGAGT TCGACGGCGC CGTCCACAAG
TTGCTGGCCG AGCCGCTGGA GCGCGAGCAG AAGGCGCTCG AGGCCATGGT GAGCGCGGGC
ACGGCTGACG AAGAGACCAA GGCGCGATAT CTCTGGCTAT CGCGCGAAGT GCAGCGGCGC
AGGCAAATGG GCTGGCGGCC CGCCGCCATG GAGGATAGTT GA
 
Protein sequence
MIPQSFIQDL LNRVDIVDVV GKYVQLKKGG ANFMGLCPFH NEKSPSFTVS PTKQFYHCFG 
CGAHGSAIGF LMEYSGQSYP DAVRELAQSV GLSVPEERNS LPPAQRAEQQ ARSLALTDAM
TRATDFYKKQ LRGAPQAIQY LKGRGLTGEI AAHFGLGYAP DDWQGLETVF GSYRDDAIAG
PLVEAGLLIE SQEKRDADGK PRRYDRFRDR IMFPIRNTKG NVIGFGGRVM GQGEPKYLNS
PETPLFSKGT ELYGLFEARH AIRENGYVLV VEGYMDVVAL AQLGFANAVA TLGTACTPVH
VQKLMRQTDA VVFSFDGDAA GRRAARRALE ACLPHVADNK TIRFLFLPAE HDPDSYVREE
GTDAFARQVQ NAMPLSRFLL QIVTEDQDLR QPEGRARAQY EAKPLLQAMP AGGLRLQIVR
ELADTTSTTP AEIEAICGLG SDSSRVGRFA QPRPRARRQA PTGLEQRVIQ LLMCYPSLAA
RLDGDARALL LDPQHSGSEA LGYLVSACDG IQGEVNFAAF SEQLAQTPYA DVYASARTAV
LREEIEEEPA THEFDGAVHK LLAEPLEREQ KALEAMVSAG TADEETKARY LWLSREVQRR
RQMGWRPAAM EDS