| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2594 |
|---|
| Symbol | |
|---|
| ID | 4039419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2820599 |
|---|
| End bp | 2821888 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637977994 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_584740 |
|---|
| Protein GI | 94311530 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.60667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATATC CTGCGAAGCT GACTGCAGTG TCCTTTGCTT GCCTGACCAT CGCGTTGGCG
GGTTGCGGAG GAGGGGGCGA TTCCACGCCA ACGAGTGCCA CCACCTCGAG CACGGGAACG
CAGGCGACCA CGCCGACCAC GCCGACAACG CAGTCTCCGA CCGTCCAGCG CAATACGCTT
CTGTCAGGCA TCACGGATCC TGGTCCGAAT GTCGGCAACG ATGGGGACTT CTATATCAAT
ACCGCCACCT GGATGATCTT TGGGCCCAAG GCCAATGGCG TGTGGCCGAC GGGCGTGTCT
CTGGCGGGGC CCGCAGGTGT GAATGGCACC AAGGGCGCGG CGGGCGCCAC CGGAAATACC
GGCGCAGCCG GCAACACCAT TCTTTCTGGC TCGGTCGACC CGACCGACAG CGTTGGCAAT
AACGGGGACT TTTACATCAA CACCGCAACG TCCACGTTGT TCGGGCCCAA GGCCAATGGC
ACGTGGCCAC CGGGTACTTC GCTGGTGGGG CCGGCTGGCC CGAGCGGAAA CCCCGGCGCG
CCTGGCACCA ACGGCAGCGC CGTGCTGTCT GGCAGCGGCG CTCCCGGCAA CACCATTGGC
AACAATGGCG ACTTCTATCT CGACACCAGT ACCTGGACGA TCTACGGGCC GAAGGCCAAT
GGCGTCTGGC CGGCGGGCGT ATCGCTGATC AACCAGGGTT CCAGCGGCAG CGGCAGCGGT
ACTGGCACTG GTGCGGGCAG CGGTTCCGAC ACCGGCGGCC ACATCCTGTC CGGGAGCGGC
GCTCCGTCCG ACAGCATCGG GGTCGACGGC GACTTCTATC TCGATACCAC AACGTTCACC
CTCTACGGTC CCAAGACGGG GGGCAAGTGG CCTGGCACCG GTATCACCAT GACCACCGGC
ACCGTCTACA GCGGCAACTT CAACGTGCCC GACACCTTGA GCCGTGGCGC GTATGTCATG
ACTGGCGACG GCGGCGCGGT GGCCTTGCCG AGCGATTTTG GTGTCACGAT CCCGTACGAC
TGTAAAAGCG TTAGCCTGAC GGCCACGACG CTTGGCAAAC CTACGGGCGT GTTGAACCTG
GCTGTGTTCA AGGTCACGGG CTCTGGCGCT TCCGCGACGT ACGCACCGGT CAGCGGGTTG
AATTGCAAGA TCAGCAATGG TCAGCAGAAC TGCAGCGTGC AGGCTCCGGC AGGTGCGATA
GCACATGGCG ACAAGCTGCA GGTACAGCTC GACAACAACC AGGCAACGGG CTGGGGCGGT
CTCTCGGTCA ACCTCGCGTG TTCGCTATAG
|
|---|
| Protein sequence | MTYPAKLTAV SFACLTIALA GCGGGGDSTP TSATTSSTGT QATTPTTPTT QSPTVQRNTL
LSGITDPGPN VGNDGDFYIN TATWMIFGPK ANGVWPTGVS LAGPAGVNGT KGAAGATGNT
GAAGNTILSG SVDPTDSVGN NGDFYINTAT STLFGPKANG TWPPGTSLVG PAGPSGNPGA
PGTNGSAVLS GSGAPGNTIG NNGDFYLDTS TWTIYGPKAN GVWPAGVSLI NQGSSGSGSG
TGTGAGSGSD TGGHILSGSG APSDSIGVDG DFYLDTTTFT LYGPKTGGKW PGTGITMTTG
TVYSGNFNVP DTLSRGAYVM TGDGGAVALP SDFGVTIPYD CKSVSLTATT LGKPTGVLNL
AVFKVTGSGA SATYAPVSGL NCKISNGQQN CSVQAPAGAI AHGDKLQVQL DNNQATGWGG
LSVNLACSL
|
|---|
| |