| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2593 |
|---|
| Symbol | |
|---|
| ID | 4039418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2819243 |
|---|
| End bp | 2820481 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637977993 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_584739 |
|---|
| Protein GI | 94311529 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.859862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG CTGTGGTGAC CTATGGAACC GAAGGCGACA CGCGCCCGCT CGCGGCGCTT
GCCCGGGCGT TGATCGACGC GGGTCATGAG GTGCATCTGC TGGCTGATGC CTCGACGCTG
CATTCGGCCG AGGCACTCGA CGTCCCGGCC TCTGCACTCA CGGGCGATAT CCGCAAGGCG
CTGGCGCCGG GGCAGGCACT GTCAAACGCG GTCTATCGCA CGGGCGGATT CCAGGACACG
AGTCGTGCGT TGGCTGCCAT CGCCAATGCC AGCACGCCGG CCTGGATGCG CGAGGTCGCC
GAGGCATCGG AGGGTTGCGA TGCGTTGATC ATCTCCGGGC TGACCGCCTT TGTCGGCCTT
TCCGTGGCCG AGTATCGCGG CATCCCAGCC ATCGGTACCG GACTGATCCC CATCACGCCG
ACCGCGGACT TCGCTTCGCC CTTCCTGCCA CCGGGCAAGG TGCCGCGATG GCTCAATCGC
GCCAGCCACC GCCTGGTGAA CGAACTGCTC TGGCAGGCAT TCAAGAAATC CACCAACGCC
GCGCGGGCCG ATGTCTGCGG CCTGCCCGCA CGCAAGCATG TCTGGAGCGA TCATCCGATG
CTCTACGGCG TGTCGCCAAG CCTGCTGCCA CGCCCACGGG ACTGGGCTGC GAACGCATCC
GTCTGCGGGC AATGGAGCGC CGCAGCGACC CACTGGATGC CGCCTCCAGC GCTCGAGGCA
TTCCTCGCGG CGGGCGAAGC GCCCATCTAC ATCGGCTTCG GCAGCATGGC CGGGTTCGAT
CATGCGGCAA CGACCGATGC GCTGATCACT GCCATCGCTG GCCGGCGCGC GCTGTTCTAT
CCGGGCTGGA GCGGCATTGA TGGGGCGTCA TTGCCGAAGA ACTTCTTCGT CGTGGGCGAG
ACCCCGCATC ATTGGCTCTT CCCCCGGACG TCGATGGCGA TTCATCACGC CGGATCGGGT
ACCTCGCATT CGGCGGCGCG GGCCGGCATA CCGTCGGTGG CGGTGCCGTT CGCGGGCGAT
CAGTTCTTCT GGGCGCAGCG GCTACGGGAC GCCGGCGTGG CCGGCGATCC GGTTCCAGGC
AAACGGCTGC GGGCTTCCAT GCTGGCGCAG GCGATTGCAT TCGCACAACG GCCAGAGGTG
CGTGATCGCG CCCGGGCACT TGGCGAACGC ATGGCGCAGG AGGATGGATT GGTTGCGGCT
GTTGGCACCA TCGAACGTCT GGTAGCGGCC AGTCTGTGA
|
|---|
| Protein sequence | MKLAVVTYGT EGDTRPLAAL ARALIDAGHE VHLLADASTL HSAEALDVPA SALTGDIRKA
LAPGQALSNA VYRTGGFQDT SRALAAIANA STPAWMREVA EASEGCDALI ISGLTAFVGL
SVAEYRGIPA IGTGLIPITP TADFASPFLP PGKVPRWLNR ASHRLVNELL WQAFKKSTNA
ARADVCGLPA RKHVWSDHPM LYGVSPSLLP RPRDWAANAS VCGQWSAAAT HWMPPPALEA
FLAAGEAPIY IGFGSMAGFD HAATTDALIT AIAGRRALFY PGWSGIDGAS LPKNFFVVGE
TPHHWLFPRT SMAIHHAGSG TSHSAARAGI PSVAVPFAGD QFFWAQRLRD AGVAGDPVPG
KRLRASMLAQ AIAFAQRPEV RDRARALGER MAQEDGLVAA VGTIERLVAA SL
|
|---|
| |