Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2589 |
Symbol | |
ID | 4039414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2815225 |
End bp | 2816457 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637977989 |
Product | type III effector Hrp-dependent protein |
Protein accession | YP_584735 |
Protein GI | 94311525 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.735479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGC TGATCATCGC CGACGACCTG TCCGGCGCCG CTGACTGCGC AATCGGCTTT GCCGCGCACG GCGCGCGCGC GGTGGTCACA CTCGACGTGG CCGATTCCGT CGGCATCGCC GATGCAGAAA TCGTGGCGGC TGATGTCGAT AGCCGCCGCA TGACGCCCGA AGATGCCACC ACGAGCAACA TCGACGCCTG GCATCGCGGC GACGGCCGGC ACCGGCGGCT GTACAAGAAA ATCGACTCGA CCCTGCGCGG TAACTGGGCC GCCGAAACGG TGGCATTGCA ACCGCTGGCG GGGCTGGCGA TCATCGCGCC AGCGTTCCCC GCGACAGGGC GCACCACACG CGGCGGCCGT ATGTTCGTCA ACGGCCAGCC ATTGGAAGAC ACCGACATCT GGCGCCTGGA AGGCCTGAAC GGTCACGCTG ACATGGTGGC GCTGCTCGCC GCGCGCGGAC TGGCCACGGC GCTACTGCCG CTCGACGTCG TTCGGGCAGG CGCGCCGGCC GTGCTCGCCG AGTTGCGTGC GCGACAGGCG GACGGCATCG CGGCCGTTGT CTGCGACGCC GAAACCGAAC AGGATCTCGT GACCCTGGCC GACGCCTCGA ATCAGCTCGA CACGCCGGCG TACTGGGTCG GCTCCGGCGG ACTGGCGCGC TCGCTGTCCA CCGTGGCGCA GGTCACGCGC GCGGAGACGA CATCTCCGGT CACGTATCAC CAGGGACCGG TGCTGACGAT GGTCGGCAGC ATGTCGGGCA TTTCCGGCAA GCAAGCCGCC TACCTGTGCG AGCGGGCGCG AATGGAAGCC CTGGTCGTGG CGCCGCAGAC GCTACGCGAT GGCCCGGGCC ATCCTGCATG GACCACCACG CGGCAATCGA TCACGAACTG CCTGAGCGCC GGCCGCGACC TGCTGCTCAG CATCGGCCGC GACGATGCAT TCGACCCGGC CGAAGGGCCG CGGCTGTCGA CCGCGCTCGC GCAACTGGCT CTGCCCTCCT TCGAACATGT TGGCGGATTG ATCGCCACCG GCGGCGAAAC CGCGCGCGCC ATGCTCGGCG CGGCCGGTAT TGCGGCGCTG GCATTGCGGC ACGAGGTCGA ACCCGGCGTG CCGCTGTCCG ACACCATTGA ATCCCTCCCT GGCGCGCCGG CGCGCCGCGT GGCCACCAAG GCCGGTGCAT TCGGCACCGA AGCTGCGTTG TGGCTGGCGT GGCAAGCCAT GCGCCAGAAC TGA
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Protein sequence | MTWLIIADDL SGAADCAIGF AAHGARAVVT LDVADSVGIA DAEIVAADVD SRRMTPEDAT TSNIDAWHRG DGRHRRLYKK IDSTLRGNWA AETVALQPLA GLAIIAPAFP ATGRTTRGGR MFVNGQPLED TDIWRLEGLN GHADMVALLA ARGLATALLP LDVVRAGAPA VLAELRARQA DGIAAVVCDA ETEQDLVTLA DASNQLDTPA YWVGSGGLAR SLSTVAQVTR AETTSPVTYH QGPVLTMVGS MSGISGKQAA YLCERARMEA LVVAPQTLRD GPGHPAWTTT RQSITNCLSA GRDLLLSIGR DDAFDPAEGP RLSTALAQLA LPSFEHVGGL IATGGETARA MLGAAGIAAL ALRHEVEPGV PLSDTIESLP GAPARRVATK AGAFGTEAAL WLAWQAMRQN
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