Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2521 |
Symbol | |
ID | 4039344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2738387 |
End bp | 2740459 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637977920 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_584667 |
Protein GI | 94311457 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.504609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCGCC CATCCATTAC AATGCTGCGC ATTCCGGCCG CCGACGGCCG GGCGTCCCAC TTTCCGCAAA ACGACTCCAT GGCGAGCAAA ACCAGTCAGT ACAGCGAATC TTCCATCCGG GTCCTGAAGG GTCTGGAGCC GGTCAAGCAA CGGCCCGGCA TGTACACCCG TACCGATAAC CCCCTGCATG TCGTGCAGGA GGTGATCGAC AACGCGTCCG ACGAAGCGCT CGGCGGCTAC GGCACCGAAA TCCTGGTCAC GCTGCATCGT GACGGCAGCA TCAGCGTGGA AGACGATGGC CGTGGCATCC CGGTGGGCAT CCACCCGGAA GAGCAGGTGC CGGTCGTGGA AATCGTCTTC ACCCGCCTGC ACGCGGGCGG CAAGTTCGAC AAGGGCAAGG GCGGCGCCTA CGCGTTCTCG GGCGGCCTGC ATGGCGTGGG CGTGTCGGTG ACCAACGCGC TGGCCACGCG CCTGGACGTC ACGGTCTGGC GCGACGGGGC GGTGTCCACG CTGACGTTCG AGCATGGCGG CGAAGTGACC CGCCCGCTGG CGACGCGCAA GATCGAGCGC GGCGAGAAGA AGAGCGGCAC GCGCGTGCAG GTGTGGCCGG ATGCGAAGTA TTTCGATTCG GCCGCAATCC CGATGGCCGA ACTGCAGCGC CTGCTGCGCA GCAAGGCCGT GCTGCTGCCG GGCGTGAAGG TCACGCTGGT GCTCGAGAAG ACTGGCGAGC AGACGGTGTG GCAGTACGAG CAGGGTCTGA AGGGCTATCT GGTCGAGGCC CTGGCCCAGG GCAGCGGCGC CGAACTCGTG ATCCCGATGT TCGAGGGCGA GCACTTTGCC GACCCGGACA AGAACGCCGG CGAGGAAGGC TTTGCCGAAG GCGAAGGCGC GTCGTGGGTG GTGGCGTGGA CCGAGGAAGG CGCGCCGGTG CGCGAATCCT ACGTCAACCT GATTCCCACG CCAGCCGGCG GCACGCACGA ATCCGGCCTG CGCGAAGGCC TGTTCCTGGC GGTGAAGAGC TTTATCGAGA TGCACTCGCT GCAGCCAAAG GGCGTGAAGC TGATGAGCGA AGACGTGTTC GCGCGCGCAT CGTTTGTGCT GTCGGCCAAG GTGCTCGATC CGCAGTTCCA GGGCCAGATC AAGGAACGCC TGAACAGCCG TGATGCCGTG CGTCTGGTTT CCACGTTCAG CCGCCCGGCG CTCGAACTCT GGCTCAACCA TCATGTCGAT TTCGGCAAGA AGCTGGCGGA ACTGGTGATT CGCCAGGCTC AGGCCCGCAC GCGTGCCGCG CAGAAGGTCG AGAAAAAGAA GGGCTCCGGC GTGGCTGTGC TGCCCGGCAA GCTGACCGAT TGCGAATCGA CCGATGTCGA GCGCAACGAG ATCTTCCTGG TGGAGGGCGA CTCCGCCGGC GGTTCGGCCA AAATGGGCCG CGACAAGGAA TTCCAGGCCA TCCTGCCGCT GCGCGGCAAG GTGCTCAATA CCTGGGAGAC CGAGCGCGAC CGCCTGTTCG CCAACAACGA AGTGCATGAC ATCGCGGTGG CGATCGGCGT CGACCCGCAT GGCCCGGACG ACGAGCCCGA CCTGTCGAAC CTGCGGTACG GCAAGATCTG CATCCTGTCC GATGCGGACG TCGACGGGGC GCACATCCAG GTGCTGCTGC TGACGCTGTT CTTCCGCCAC TTCCCGAAAC TGATGGCCAA CGGCAACGTC TGCGTGGCAC GCCCGCCACT GTTCCGCGTG GATGCGCCGG CGCGTGGCAA GAAGCCGGCG CAGAAGCTCT ATGCGCTGGA CGAAGGCGAG CTTGAAGCCA TCCAGGACAA GTTGCTCAAG GATGGCGTCA AGGAAGGCGC GTGGCAGATT TCGCGCTTCA AGGGCCTTGG CGAGATGAGC GCCGGGCAGC TCTGGGAGAC GACGATGAAT CCCGATACGC GCCGGCTGCT GCCGGTGTCG CTGGGTGAGT TCGACATGCC GCAGACCGTC ACGATGATGA ACATGCTGAT GGGCAAGGGC GAGGCCTCGC AACGACGCAG CTGGCTGGAA GAGAAGGGCA ACGAAGTGGA GGCCGACATC TGA
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Protein sequence | MPRPSITMLR IPAADGRASH FPQNDSMASK TSQYSESSIR VLKGLEPVKQ RPGMYTRTDN PLHVVQEVID NASDEALGGY GTEILVTLHR DGSISVEDDG RGIPVGIHPE EQVPVVEIVF TRLHAGGKFD KGKGGAYAFS GGLHGVGVSV TNALATRLDV TVWRDGAVST LTFEHGGEVT RPLATRKIER GEKKSGTRVQ VWPDAKYFDS AAIPMAELQR LLRSKAVLLP GVKVTLVLEK TGEQTVWQYE QGLKGYLVEA LAQGSGAELV IPMFEGEHFA DPDKNAGEEG FAEGEGASWV VAWTEEGAPV RESYVNLIPT PAGGTHESGL REGLFLAVKS FIEMHSLQPK GVKLMSEDVF ARASFVLSAK VLDPQFQGQI KERLNSRDAV RLVSTFSRPA LELWLNHHVD FGKKLAELVI RQAQARTRAA QKVEKKKGSG VAVLPGKLTD CESTDVERNE IFLVEGDSAG GSAKMGRDKE FQAILPLRGK VLNTWETERD RLFANNEVHD IAVAIGVDPH GPDDEPDLSN LRYGKICILS DADVDGAHIQ VLLLTLFFRH FPKLMANGNV CVARPPLFRV DAPARGKKPA QKLYALDEGE LEAIQDKLLK DGVKEGAWQI SRFKGLGEMS AGQLWETTMN PDTRRLLPVS LGEFDMPQTV TMMNMLMGKG EASQRRSWLE EKGNEVEADI
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